Aeromonas hydrophila AH10: VU14_06150
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Entry
VU14_06150 CDS
T03886
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ahi
Aeromonas hydrophila AH10
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahi03032
]
VU14_06150
03400 DNA repair and recombination proteins [BR:
ahi03400
]
VU14_06150
Enzymes [BR:
ahi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VU14_06150
DNA replication proteins [BR:
ahi03032
]
Prokaryotic type
DNA Topoisomerases
VU14_06150
DNA repair and recombination proteins [BR:
ahi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VU14_06150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AKA16471
LinkDB
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Position
1306808..1309429
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDYVVKSSVGHVRDLPTSGSASNEPKKPVIRGIKLSEA
EKAAKDRNALFSRMGINPTAGWQANYQILPGKEKVVSELQSLAEKADTIYLATDLDREGE
AIAWHLREIIGGDDSRYKRVVFNEITKTAIQEAFAQPSELNIHRVNAQQARRFLDRVVGY
MVSPLLWKKLARGLSAGRVQSVAVRLIVDKEREIKAFVPVEFWDLNADLLTADKSDLRME
VVSRNGADFKPVTQAETFAALAALEGVDYKVVNREDKPTGSKPSAPFITSTLQQAASTRL
SFGVKKTMMMAQRLYEAGYITYMRTDSTNLSKEAVEAVREYIGEQYGAAYLPSDPNLYGA
KANAQEAHEAIRPSSVLVTAEMLEGMEPDAMRLYDLIWRQFVACQMTPAQYDSSTLTVKA
GEFELKARGRTLRFAGWTKALPPMGRKGEDSQLPAVTVGEILKLVKLDPRQHFTKPPARF
TEAALVRELEKRGIGRPSTYASIISTIVDRGYVRVESRRFFAEKMGEIVTDRLVENFVEL
MNYEFTAKMEDKLDGIAEGSLEWKKVLDAFYAEFTQELEKADKAPEEGGMRANQMVLTDI
DCPDCGRKMGIRTATTGVFLGCSGYALPPKERCKKTINLVSADEFVSATDGEEAETEALR
AKHRCGVCGTAMDAYIIDDSRKLHVCGRNPDCDGYEIEKGQFKLKGYEGPSIECDRCGSE
MQLKNGRFGKYMGCTNDTCKNTRKILKNGDIAPPKEDPVPLPELKCTQSDAHFVLRDGAA
GLFLAASNFPKSRETRAPLVEELKRFKERLSPKHQYLADAPASDPDGNPAIVRFSRKTKE
QYVMTEVNGKATGWTAHYDNGKWQESLAKSKKA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcactggtcatagtggagtctccggccaaggccaagaccatcaacaaatat
ttgggcaaggactacgtggtgaaatccagcgtcggtcacgtgcgcgatctgcccaccagc
ggcagcgccagcaacgagcccaaaaaacctgtcattcgcggcatcaagctgagcgaagca
gagaaggctgccaaggatcgcaatgccctgttctcacggatggggatcaatccgaccgca
ggctggcaggccaactaccagattttgcccggcaaggaaaaagtggtcagcgagttgcag
agtctggccgagaaggccgacaccatctatctcgcaaccgacttggatagagagggagaa
gcgatcgcctggcacttgcgcgagatcatcggcggcgacgacagccgctacaagcgcgtg
gtgttcaacgagatcaccaagaccgccatccaggaggcgtttgcccagccatccgagctg
aacattcaccgcgtcaatgcccagcaggcccgtcgtttcctcgaccgggtggtgggttac
atggtctccccgctgctctggaagaagctggcccgcggcctctccgccggccgggtacag
tccgtcgcggtgcgtctcatcgtcgataaagagcgcgagatcaaggcgttcgtgccggtc
gagttctgggatctcaacgccgatctgctgaccgccgacaagagcgatctgcggatggaa
gtggtcagccgcaacggcgccgacttcaagccggtgacccaggccgagaccttcgccgcc
ctggccgccctggaaggggtcgactacaaggtggtgaaccgggaagacaagccgaccggc
tccaagccgtccgcccccttcatcacctccaccctgcagcaggcagcctctacccggctg
agcttcggggtcaagaagaccatgatgatggcccagcgtctctatgaagcgggttacatc
acctatatgcgtaccgactccaccaacctcagcaaagaggcggtcgaggcggtgcgggaa
tacatcggcgagcagtatggcgccgcctacctgccgagcgatccaaacctgtacggtgcc
aaggccaatgcccaggaggcccacgaggcgatccgtccctccagcgtgctggtgaccgcc
gagatgctggaagggatggagccggacgccatgcggctctatgacctcatctggcgtcag
tttgtcgcctgtcagatgacgccggcccagtacgactcctccaccctgaccgtcaaggcg
ggcgagttcgagctcaaggcgcgcggtcgtaccctgcgcttcgccggttggaccaaggcg
ctgccgcccatgggccgcaagggcgaagacagccagttgccggcggtgaccgtcggcgag
atcctcaaactcgtcaagctggatccgcgccagcacttcaccaagccgcccgcccgcttc
accgaagcggcgctggtacgcgagctggaaaagcgcggcatcggccgtccgtctacctac
gcttccatcatctccaccatcgtcgatcgtggttatgtgcgggtcgagagccgtcgtttc
ttcgccgagaagatgggtgagatcgtcaccgaccgtctggtcgagaacttcgtcgagctg
atgaactacgagttcaccgccaagatggaagacaagctcgatggcatcgccgaagggagc
ctggaatggaagaaggtgctggatgccttctacgccgagttcacccaggagctggagaaa
gcggacaaggcgccggaagaggggggcatgcgtgccaaccagatggtgctgaccgacatc
gactgcccggattgcggccgcaagatgggcatccgtaccgccaccaccggggtgttcctc
ggctgttccggctacgcactgccgcccaaagagcgctgcaagaagaccatcaacctggtc
tccgccgatgagtttgtctccgccaccgacggtgaagaggccgagaccgaggcgctgcgt
gccaagcatcgctgtggcgtgtgtggcaccgcgatggatgcctacatcatcgacgacagc
cgcaagctgcacgtctgtggtcgcaacccggattgcgatggctacgaaatcgaaaaaggc
cagttcaagctcaagggctacgaagggccgagcatcgagtgtgaccgctgcggctccgag
atgcagctcaagaacggccgcttcggcaagtacatgggttgcaccaacgacacctgcaag
aacacccgcaagatcctgaaaaacggtgatatcgcgccgccgaaggaagacccggtcccg
ctgccggagctcaagtgcacccagtccgacgcccacttcgtgctgcgtgacggggcggcc
ggcctgttcctggccgccagcaacttcccgaaatcccgcgagacccgtgcaccgctggtg
gaagagctcaagcgcttcaaggagcgtctgtcgcccaagcaccagtatctggccgatgcc
ccggcgtcagatcctgacggaaaccccgccatcgtgcgcttcagtcgcaagaccaaggag
cagtacgtgatgaccgaggtcaacggcaaggcgaccggctggacggcgcactacgacaac
ggcaagtggcaggagagcctggccaagtcgaagaaggcgtga
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