Aeromonas hydrophila AH10: VU14_09400
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Entry
VU14_09400 CDS
T03886
Name
(GenBank) diguanylate phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
ahi
Aeromonas hydrophila AH10
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahi03019
]
VU14_09400
Messenger RNA biogenesis [BR:
ahi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VU14_09400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
DUF4131
Motif
Other DBs
NCBI-ProteinID:
AKA17071
LinkDB
All DBs
Position
complement(2088767..2090407)
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AA seq
546 aa
AA seq
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MLNKLGSNQLLVIALLCAPLLLLQGLWLAFTSTLLTLLIILATSLLGFGLLSMLTLRLQQ
VERSHQEQVWCRALQLRDPTCLTTPEAQAALQQLLAHFNEAERDAHRQISELHNQATQDE
LTQLQNRHAFRRDMTELLQRDQDTQTATLVLIRATELGKLNAQRGFQSGDAYIKDIANII
TRVVSRFPGHQVYRISGADFAVLVQPVANIPPPLLGRDLKIAFDHYQQQHELESAAYSGL
TRLSSGQKIEAILARADLALARAQTETVNGWAIQQDDSVVELQGQHHWKLVLTELLEQER
ISFTYQPIQPMHRSMLAYNEIYTRFSSADGTVLPTDTLFAMAQRLDMVMRLEQMLVTHIM
RQYRAFGANQSRWGINLSSNLLQNSAFLIWLDRQLLNDPNTSANLVFELDEEHLERNLTG
AKRVFELLRRNGSRSAICNFGKGIGSFNLFRELKPDYIKLDPALITGLEQDLTNQQFVRM
IVDVSHRMGCQVIAEGVEQLGQKQLLQGMYVDGLQGYLIAKPQQLRPDISQLGLFTEDAS
TSAESE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagctcgggagcaaccaactgctggtgatcgctctcctctgtgctcccctg
ctgctgttgcaggggctctggctcgccttcaccagtacgctgctgaccctgcttatcatc
ctcgccaccagcctgctcggcttcggcttgctgagcatgctgaccctgcgccttcaacag
gtggagcgcagccaccaggagcaggtgtggtgccgggcgctgcagctgcgcgaccccacc
tgcctgaccacccccgaggctcaggccgccctgcagcaactgcttgcccacttcaacgag
gccgagcgcgacgctcaccgccagatcagcgaactgcacaaccaggcgacccaggacgag
ctgacccagctgcaaaaccgccacgcctttcgccgtgacatgaccgagctgctgcagcgg
gatcaggacacccagaccgcgaccctggtgctgatccgcgccactgagcttggcaagctc
aacgcccagcgcggctttcagtcgggggatgcctacatcaaagatatcgccaatatcatc
accagggtggtcagccgcttccccggccatcaggtctaccgcatctcgggggccgacttc
gcggtgctggtgcagccggtcgccaacatcccgccccccctgctcgggcgggatctgaag
atcgccttcgatcactatcagcagcagcatgaactggagagtgccgcttactccgggctg
acccggctcagcagcggccagaagatcgaggccattctggccagggcggatctggcactg
gcccgcgcccagaccgagacggtcaacggctgggccatccagcaggatgacagcgtggtg
gagctgcaggggcagcatcactggaagctggtactgaccgagctgctggagcaggagcgc
atcagcttcacctaccagccgatccagccgatgcaccgcagcatgctggcctacaacgag
atctacacccgcttcagcagcgccgacggcactgtgctgcccaccgacaccctgttcgcc
atggcccagcggctggacatggtgatgcggctggagcagatgctggtgacccacatcatg
cgccagtaccgggcctttggcgcgaatcagagtcgctggggcatcaacctctccagcaat
ctgctgcaaaacagcgcctttctgatctggctggaccgacagctgctcaacgaccccaac
accagcgccaacctggtgtttgaactggatgaagagcatctggagcgcaacctgaccggg
gccaagcgggtgttcgagctgctcaggcgcaacggcagccgctccgccatctgcaacttc
ggcaaggggatagggtcatttaacctgtttcgcgagctcaagcccgactatatcaagctg
gatcccgcactcatcaccgggctggagcaggatctgaccaatcagcagtttgtgcggatg
atcgtcgacgtgtcacaccggatggggtgtcaggtgattgcggaaggggtggagcagctg
ggtcagaagcagctgctgcagggcatgtatgtggacgggctgcagggctatctcatcgcc
aagccccagcagttgcgaccggatatcagccagctcgggctgtttactgaggatgcttca
acttcagcagagtcagaatga
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integrated database retrieval system
