Aeromonas hydrophila AH10: VU14_09720
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Entry
VU14_09720 CDS
T03886
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ahi
Aeromonas hydrophila AH10
Pathway
ahi03030
DNA replication
ahi03430
Mismatch repair
ahi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VU14_09720
03430 Mismatch repair
VU14_09720
03440 Homologous recombination
VU14_09720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahi03032
]
VU14_09720
03400 DNA repair and recombination proteins [BR:
ahi03400
]
VU14_09720
Enzymes [BR:
ahi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VU14_09720
DNA replication proteins [BR:
ahi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VU14_09720
DNA repair and recombination proteins [BR:
ahi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VU14_09720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_B_N
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AKA17133
LinkDB
All DBs
Position
complement(2180861..2181487)
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AA seq
208 aa
AA seq
DB search
MLSRLRRHWHGRRVKDPAFAPLYADPPADEWVALDFETTSLDPAQAEIVAIGAVRIQGNR
VLTGEALSIRVQAPASLSEHSVVIHGLRHQDLQQGMTQEAALRLLLAFIGPRELVGYHIA
YDLRILNLACQRCWGLTLAQRGIEVSRLYHDHLYRRYPDAAIDLHLAAISSHLGLPALPA
HDALSDAITAALIFLRLTRGGPLAYPKV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgttgagccgcctgcgccgtcattggcatggccgccgtgttaaagacccggcgtttgcc
ccgctctatgccgacccacccgccgatgagtgggtggccctcgacttcgagaccaccagc
ctggatccggcccaggccgagatcgtcgccatcggcgcggtgcgcattcagggcaaccgg
gtgctgaccggcgaggcgctgtccatccgggtgcaagcgccggccagcctgagcgaacat
tcggtggtgatccacggtctgcgccatcaggatctacaacagggcatgacgcaggaagcc
gcgctgcgcctgctactcgcctttatcggcccgcgcgaactggtggggtatcacatcgcc
tatgacctgcggatcctcaatctcgcctgccagcgatgctgggggctgaccctggcgcag
cgcgggatagaggtgagccggctctaccacgatcacctctatcgccgctatcccgatgct
gccatcgatctgcatctggccgccatcagcagccacctgggcctgccggccctgcccgcc
cacgacgccctgagcgatgccatcactgccgccctcatcttcttgcgcctcacccggggc
gggccactggcttatcccaaagtctaa
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