Aeromonas hydrophila AH10: VU14_10400
Help
Entry
VU14_10400 CDS
T03886
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ahi
Aeromonas hydrophila AH10
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahi03016
]
VU14_10400
Enzymes [BR:
ahi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
VU14_10400
Transfer RNA biogenesis [BR:
ahi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VU14_10400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
CCB2_CCB4
Motif
Other DBs
NCBI-ProteinID:
AKA17255
LinkDB
All DBs
Position
2341204..2342343
Genome browser
AA seq
379 aa
AA seq
DB search
MALINAQAQMHYQLISQQAELDQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGEHL
ALLDPLTLDLSSLWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLAAAFLGYG
VSVGFGALVNEFLAVELEKDQARTDWLARPLTPRQLEYAAADVFYLLPLYEKVMAKLHES
GKFAWFEQECQNHSARKTQTSDPRQAYLDIVNAWQLGRRELAILRELAAWRQQEAVRRDL
ALNFVVKELHLFKVAERRPTSLRDLNELGLAPIEIKIHGKRMLDIVAAAQQSDPDSWPEP
IRRLVDYPQYKAELKRIKGMVEEKAKASNIPPELVASKKIIHQYFTWSWRMSDEERARAD
KPMLLQGWRHELVGHLLAQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
ttggccctgatcaacgcgcaggcacagatgcactatcaactcatttcacagcaagccgaa
ctggatcagtatctcgcctccctggccgacgttcccctggccatcgatactgaattcgtt
cgcacccgcacctactatccccagctgggcctgttccagatctatgacggtgagcatctg
gcactgctggatccgctgaccctggatctctcctccctctggcaacggcttggccgggca
gggcagatcgccatcttgcacgcctccggtgaagatctggagcttatccagcatcaggcg
ggccatctgcccaaccagatgcacgacacccagctggctgccgcctttctgggttacggg
gtatcggtcggttttggcgccctggtcaacgagtttctcgcggtggagctggaaaaggat
caggcccgcaccgactggctggcacgcccgcttacacctcgccagctcgagtacgcggcg
gccgacgtgttttatctgctgccgctctacgagaaagtgatggccaagctgcatgagagc
ggcaagttcgcctggttcgagcaggagtgccagaaccactccgcccgcaagacccagacc
agcgatccccgccaggcctatctcgacatcgtcaatgcctggcaactggggcgccgcgag
ctggctatcttgcgtgagctcgccgcctggcgtcagcaagaggcggtgcgccgggatctg
gccctcaacttcgtggtcaaagagctgcatctgttcaaggtggcggagcgcagacccacc
tcgctgcgcgatctgaacgagctggggctggcccccatcgagatcaagatccacggcaag
cggatgctcgacatcgtggccgcggcccagcagagcgatcccgacagctggcccgagccc
attcgccggctggtggactacccccagtacaaggccgagctcaagcgcatcaaggggatg
gtggaagagaaggccaaggccagcaacattccaccggagctggttgccagcaagaagatc
attcaccagtacttcacctggagctggcgcatgagcgacgaagagcgcgcccgggccgac
aagccgatgctgctgcaaggctggcgccatgaactggttggccatttgctggcacagtaa
DBGET
integrated database retrieval system
