Aeromonas hydrophila AH10: VU14_15605
Help
Entry
VU14_15605 CDS
T03886
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
ahi
Aeromonas hydrophila AH10
Pathway
ahi02020
Two-component system
ahi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VU14_15605
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VU14_15605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahi03021
]
VU14_15605
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ahi02035
]
VU14_15605
Transcription machinery [BR:
ahi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VU14_15605
Bacterial motility proteins [BR:
ahi02035
]
Flagellar system
Flagellar assembly proteins
Stator
VU14_15605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
AKA18213
UniProt:
A0AAX3P961
LinkDB
All DBs
Position
complement(3493931..3494650)
Genome browser
AA seq
239 aa
AA seq
DB search
MNKAQAYLRHQDSYVLVERHAPLVKRIAQHLLARLPSSVLLDDLIQAGMIGLLEASRNFD
GSKGASFETYAGIRIRGSMLDEIRRGDWVPRSVHRNSRTIAEAIENVEQAHGRDARDSEV
AAQMGVSLGEYHAMLQDVSCGKIIGIEDLGVSEDVIGHPDDEPGSNGFDELAAERFQGAL
AEHIGRLPEREALVLSLYYDEELNLREIGEVLNVSESRVSQIHSQAMHRLRARLRDWHV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcccaagcgtacttgcgtcatcaggattcctatgtgctggtcgagcgccat
gctccgctggtgaaacggatcgcccagcatttgttggctcgcctgccaagcagtgtcttg
ctggatgacctgatccaggcaggtatgattggattgctcgaagcctcccgcaattttgac
ggcagcaagggggcgagctttgaaacctacgccgggatccgcatccgtggttccatgctc
gacgagatccggcggggtgactgggtgccgcgttcggtccaccgcaacagccgcaccatc
gccgaagccatcgaaaatgttgaacaagcccatggccgtgatgctcgcgatagcgaggta
gccgcccagatgggggtcagccttggtgagtatcacgccatgctgcaggatgtctcctgc
ggcaagatcatcggcatcgaagatctcggcgtcagcgaggatgtcatcggtcatcccgat
gacgagccgggcagcaacgggtttgatgaactggcagccgagcgttttcaaggggcgctg
gccgaacacatcggccgcctgccggagcgggaagcgctggtgctctccctttactacgat
gaagaactgaacttgcgtgaaataggcgaggtattgaacgtcagcgagtctcgcgtgagc
cagatacacagtcaggcgatgcacagattacgcgcgcgtttaagagattggcatgtataa
DBGET
integrated database retrieval system
