Aeromonas hydrophila AH10: VU14_16735
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Entry
VU14_16735 CDS
T03886
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ahi
Aeromonas hydrophila AH10
Pathway
ahi03030
DNA replication
ahi03430
Mismatch repair
ahi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VU14_16735 (dnaE)
03430 Mismatch repair
VU14_16735 (dnaE)
03440 Homologous recombination
VU14_16735 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahi03032
]
VU14_16735 (dnaE)
03400 DNA repair and recombination proteins [BR:
ahi03400
]
VU14_16735 (dnaE)
Enzymes [BR:
ahi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VU14_16735 (dnaE)
DNA replication proteins [BR:
ahi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VU14_16735 (dnaE)
DNA repair and recombination proteins [BR:
ahi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VU14_16735 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AKA19547
LinkDB
All DBs
Position
complement(3756256..3759735)
Genome browser
AA seq
1159 aa
AA seq
DB search
MAEPRFIHLRVHSDFSMVDGLQKINPIVGAAAANNMPALALTDQMNMCGLVRFYGAAHGK
GVKPIVGADFWVQSDELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKAW
LAEHAKGVIVLSGGREGDVGKFLLKGNRQMTEQCLAFYQTHFPDAYYLELLRTGRPDEEV
YLHMAVAIATEFALPVVATNEVVFLTADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMAELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEDFLVMKSKEGL
EERLEFLFPEPAVRAERRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSE
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKRSFDLL
QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGKEA
ISYPDEKWQHESLQPILEPTYGIILYQEQVMQIAQTLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILEARDRDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSGELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQQIDDRFFPRLCEILEPARAGVCPVQVNYRRPGSRVRLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccccgttttatccacctgcgggtccactccgacttctccatggtcgacggc
ctgcagaagatcaatcccatcgtcggcgcggcggcggccaacaacatgccggcgctggcg
ctgaccgaccagatgaacatgtgcggcctggtacgcttctacggcgccgcccacggcaag
ggcgtcaagcccatcgtcggggccgacttctgggtgcagagtgacgagctcggcgacgag
cagttccgcctcaccctgctcgccatggacaacgacggctaccagaacatcaccctgctc
atctcccgcggctatcagcgcggtcacgtgcaggggcgcccggtcatcgacaaggcctgg
ctggccgagcacgccaagggagtgatcgtgctctccggcgggcgcgagggggacgtgggc
aagttcctgctcaagggcaaccgccagatgaccgagcagtgtctcgccttctatcagacc
cacttccccgacgcctattacctggagctgctgcgcaccggccgccccgatgaagaggtc
tacctgcacatggcggtggccattgccaccgagttcgcgctgccggtggtggccaccaac
gaggtggtgttcctcaccgccgatgacttcgatgcccacgagatccgggtcgccatccac
gacggctacaccctgatggacaagcgccggccgcgccgctacagcccgcagcagtatctg
cgcagccaggaggagatggcggagctgtttgccgacatccccgaggcgctggagaacacg
gtggagatcgccaagcgctgcaacgtgacggtgcgcctcggcgaatacttcctgcccaac
ttcccgaccggtgacatgaccaccgaagatttcctggtcatgaagtcgaaagaggggttg
gaggagcggctcgaattcctgttcccggagccggcggtgcgggccgagcgccgtcccgag
tatgacgagcggctcgacatcgagctcaaagtgatcaaccagatgggcttcccgggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcatccccgttggcccg
ggccggggctcgggggcgggttccctggtggcctacgccctcaagatcaccgatctcgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgggtatccatgccc
gacttcgacgtcgacttctgcatggacaggcgcgacgaggtgatcgaccacgtctccgag
atgtacggccgggaggcggtatcgcagatcatcaccttcggcagcatggcggccaaggcg
gtggtgcgggatgtgggccgggtgctgggccacgcctatggcttcgtcgatcgcatctcc
aagctcattccgccggatccgggcatgacgctcgccaaggcgttcgaggccgaacccaag
ctgcccgagctctacgagcaggacgaggaggtcaaggacctcatcgacatggcgcgccgc
ctcgaaggggtggtgcgtaacgccggtaaacacgccggtggcgtggtgatcgcgcccacc
aagatcaccgacttcgcgccgctctactgcgatgacgaaggccatcacccggtcacccag
ttcgacaagaacgacgtggagtacgccgggctggtgaagttcgacttcctcggcctgcgc
acgctcaccatcatcgactgggcgctcggcatgattaacccgcgccttgccaaagagggc
aagccgccggtcgacatcgccgccatccccatcgacgacaagcgctcgttcgacctgctg
cagcgctacgagaccactgcggtattccagctcgaatcccgtggcatgaaggatctcatc
aagcggctgcagcccgactgcttcgaagacatgatcgcactggtggcgttgttccgccca
ggcccgctgcagtcgggcatggtggacaacttcatcgagcgcaagcacggcaaggaggcc
atctcctatccggacgagaagtggcagcacgagagtctgcagccgatcctcgagcccacc
tacggcatcatcctctatcaggagcaggtgatgcagattgcccagaccctggcgggttat
acgctgggtggcgcggacatgctgcgccgggcgatgggtaagaaaaaacccgaagagatg
gccaagcagcgggccggcttcgaggagggcgcggtcaagaacggcgtcgacggcgagctg
gcgatgaagatcttcgatctggtggagaagtttgcaggctacggcttcaacaaatcccac
tccgccgcctatgcgctggtctcctaccagaccctctggctcaagacccacttcccggcg
gagttcatggcggcggtgatgaccgctgacatggacaacaccgacaagatagtgaccctg
gtggacgagtgccagcggatggggctgaccgtgatcccgccggacgtgaacaccggtcgc
taccgcttcagcgtcaacgaagatggtcacatcgtctacggcatcggtgcggtgaagggg
gtgggggaaggccccatcgatgcgatcctggaagcgcgggatagggacgggccgtttcgc
gatctgttcgacttctgcaaccgggtcgacatcaagaagctcaacaagcgggtgatggag
aagctcatcctctccggcgccatggaccggctcggcccccaccgcgccgccctgatggcg
accctggaggaggcgatgcgcgccgccgagcagcatgccaaggcgcaggcggtgggtcag
gtcgacatgttcggcgtgctcaccgaagagatagacgacgtcaagaaggcgttcgccaac
gtgccgcactggcctgacaaggtgtggctggaaggggagcgcgagaccctcgggctctac
ctcaccggtcaccccatcaaccagtacagcggcgagctgcgtcgttatacctcgggtcgt
ctgtgcgatctgcaccccacctcccgcgataccgtgaccacggccgcaggcttggtgatt
gcggcgcgcagcatggtgaccaagcgtggcaacaagatggggatctttaccctggacgac
cgttccggtcgcctcgatgtgaccctgttcagtgaagcgctggaaaagtatgaagaattg
atgcaaaaagaccgtattttggtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgtgaattactggatatcaacgatgcgagagagcgttttgcc
agggcgatccgcatctctctcgatgaacagcagattgatgatcgttttttcccgcgtttg
tgcgagattttggaacccgcccgtgccggagtttgtccggttcaggtaaactatcgtcgc
cccggttcccgggtgcgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgcgtcctgcttggacgagagcgggttgaattggtttttgattag
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