Aeromonas hydrophila AH10: VU14_21380
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Entry
VU14_21380 CDS
T03886
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ahi
Aeromonas hydrophila AH10
Pathway
ahi03420
Nucleotide excision repair
ahi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VU14_21380 (uvrD)
03430 Mismatch repair
VU14_21380 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahi03400
]
VU14_21380 (uvrD)
Enzymes [BR:
ahi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VU14_21380 (uvrD)
DNA repair and recombination proteins [BR:
ahi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VU14_21380 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
VU14_21380 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AKA19297
LinkDB
All DBs
Position
complement(4748581..4750752)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
AERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRNNARDQGQNLWQSAKALLNDKVLTGRAGNAVRGFVDLIDALEEQVSLLPLHQQ
ADIAIQNSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGIVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaacgacaagcaaagagatgccgttgcggcg
ccccgcagcaacctgctggtgctggccggtgccggttcgggcaagacccgggtactggtg
caccgtatcgcctggctgatgcaggtggaacgctgttcacccttctccatcatcgcggtc
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaagtgatcggcgac
ggcgtgcgcggcatgtggatcggcaccttccacggtatcgcccaccgtttgctgcgggcc
catcatctggatgcgggcttgccgcaggatttccagatcctcgactccgacgaccagtac
cggctgatccgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccgcgc
gccgtaatgggctacatcaacggcaagaaagatgaaggcttgcgtcccggcgacatcgac
ctctacggcgaccccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccggtctggtggactttgcagaactcttgctgcgcgcccacgagctgtgg
ctgaacaagccgcacatcctcgagcactaccgcgaccgcttccagaacatcctggtggac
gagtttcaggataccaacggcatccagtacgcctggctgcggatgctggccggcgacagc
ggcaaggtgatgattgtcggcgacgatgaccagtccatctacggctggcgcggcgccaag
atcgagaacatccagcgcttcctgaccgactatcagggcgccgagaccatccgcctcgag
cagaactaccgctccaccgccaatatcctcaaagccgccaactgcgtcatcgccaacaac
gccgagcgccttggcaaggagctgtggaccgagggggccgagggggagccgatttcgctg
tacgccgccttcaacgaggtggacgaggcccgcttcgtggtcggccgcctcaaggattgg
aaggagaaggggggcttgctcgccgactgtgccatcctctaccgctccaacgcccagtcg
cgggtgctggaagaggcgctgatgcaggacgccatgccgtaccgcatctatggcggcctg
cgcttcttcgagcgccaggaaatcaaggacgccatggcgtacctgcgccttatcaacaac
cgtggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgcggcattggcgat
cgcaccctcgaaatcctgcgcaacaatgctcgtgatcagggccagaacctgtggcaatcg
gccaaggcactgctcaatgacaaggtgctgaccggtcgcgccggcaacgcggtgcgcggc
tttgtggatctcatcgacgcgctggaggagcaggtctccctgctgccgctgcaccagcag
gcggatatcgccatccagaactccggcctcaaggcgatgtatctggcggaaaagggcgag
aaatcccaggcgcgggtagagaacctggacgaactggtcaccgcctgccgccagtaccag
cgcccggacgagctggaagacatgagtgatctctccgccttcctcgcccatgcggcactg
gagtccggcgagaatcaggcggacgaatacgccgacgcggtgcagctgatgaccctgcac
agcgccaaggggctggagttcccgctggtgctgctggtcggcgtggaagagggcatgttc
cccagccagcaatctaccgaggagtcgggccggctcgaggaggagcggcgcctctgttat
gtcggcatgacccgcgccatggagaagctctacatctgttatgccgagagccgccgcatc
tacggccgcgagatgttccacaagccgagccgctttatccgcgaaatgcccgccgagtgc
ctggaagagatccggctgcgcacccaggtcagccgccccacccagtacggccgctttagc
cagaacgaggtgcagcagagcttcgacgccagcggcatcaagctcggccagcgggtgctg
catccgaaattcggggaaggcatagtgctcaacttcgaaggggtcggccagcagagccgt
gtacagatccagtttgacgacgtcggcgccaagtggctggtgacggcgtatgcgagattg
gaggcgctctga
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