KEGG   Aeromonas hydrophila AH10: VU14_21990
Entry
VU14_21990        CDS       T03886                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ahi  Aeromonas hydrophila AH10
Pathway
ahi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ahi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VU14_21990 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahi03021]
    VU14_21990 (rho)
   03019 Messenger RNA biogenesis [BR:ahi03019]
    VU14_21990 (rho)
Transcription machinery [BR:ahi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     VU14_21990 (rho)
Messenger RNA biogenesis [BR:ahi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     VU14_21990 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 OB_RNB AAA_25 S1CSD-TOTE-2 AAA Mor FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AKA19408
UniProt: A0A081UXF8
LinkDB
Position
complement(4883208..4884473)
AA seq 421 aa
MNLTELKNTPVSELVQLGESMGLENLARAHKKDIIFAILKAHAKGGEDIFGDGVLEILTD
GFGFLRSADGSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDRPENSRNKILFENLTPLHANERLRMERGNGSTEDITARVLDLASPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCELIVLLIDERPEEVTEMQRMVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVYPAIDI
TRSGTRKEELLTTGDELQKMWILRKIVHPMGEIDGIEFLIDKLAMTKTNDEFFDAMRRQQ
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatctgactgaattaaagaacactcctgtgtccgagctggtacagcttggcgaatcc
atggggttggaaaatctggctcgggcgcacaagaaagacattattttcgcgatcctcaag
gcgcacgccaagggtggcgaggatatctttggcgacggtgtgctggaaatcctgaccgat
ggtttcggcttcctgcgtagtgcagacggctcctacctggccggcccggacgacatctat
gtctccccgagccagatccgccgtttcaacctgcgtaccggcgataccatctccggcaag
atccggccaccgaaagagggcgaacgctatttcgcgctgctcaaggtcaacgaggtcaac
tacgaccgtccggaaaactcccgcaacaagatcctgtttgaaaacctcactccgctgcac
gccaacgagcgtctgcgcatggagcgtggcaacggttccaccgaagacatcaccgcccgt
gtgctggatctggcttccccgatcggtaaaggccagcgcggcctcatcgtcgcaccgccc
aaggccggtaagaccatgctgctgcagaacatcgcccagagcatcgcctacaaccaccct
gactgcgaactgatcgtcctgctgatcgacgagcgtccggaagaagtgaccgagatgcag
cgtatggtgaagggtgaagtgatcgcctccaccttcgacgagccagcttcccgtcacgtc
caggtcgccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtgatcctgctggactccatcacccgtctggctcgcgcctacaacaccgtcatcccgtca
tccggcaaggttctgaccggtggtgtggacgccaacgccctgcaccgtccgaagcgcttc
ttcggtgccgcgcgcaatgttgaagagggcggcagcctgaccatcatcgccaccgcgctg
atcgataccggctccaagatggatgaagtcatctacgaagagttcaagggtaccggcaac
atggaactgcacctctcgcgcaagattgccgagaagcgtgtctacccggccatcgacatc
actcgctccggcacccgcaaggaagagctgctgaccaccggcgacgagctgcagaagatg
tggatcctgcgcaagattgtgcacccgatgggcgagatcgacggcatcgagttcctgatc
gacaagttggccatgaccaagaccaacgacgagttcttcgacgccatgcggcgccagcag
aagtaa

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