Aeromonas hydrophila J-1: V469_03120
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Entry
V469_03120 CDS
T03574
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ahj
Aeromonas hydrophila J-1
Brite
KEGG Orthology (KO) [BR:
ahj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahj03400
]
V469_03120
DNA repair and recombination proteins [BR:
ahj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V469_03120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
AAA
SLFN-g3_helicase
ABC_tran
GvpD_P-loop
AAA_22
AAA_24
AAA_14
nSTAND3
Rad51
AAA_16
NTPase_1
DUF7125
AAA_29
AAA_5
PAXNEB
Zeta_toxin
Zn_ribbon_8
zf-RING_10
DAP3
DZR
Motif
Other DBs
NCBI-ProteinID:
AJE34960
LinkDB
All DBs
Position
659478..660842
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AA seq
454 aa
AA seq
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MAKNKTAYVCTECGADFTRWQGQCSECKEWNTISEVRLGSVTPGKSARYTGYAGAIGSQV
QTLAEIATTEIPRFSSGFKELDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTMCGLAERM
KTLYVTGEESLQQVAMRASRLGLPTDKLRMLSETSVEQICLIAQQEQPQIMVIDSIQVMH
VADVQSAPGSVSQVREAAALLTRYAKQNHVAIFMVGHVTKDGTLAGPKVLEHCIDCSVLL
DGGHDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEQAPGSVVMVI
WEGTRPLLVELQALVDYSQLSNPRRVAVGMDHNRLAMLLAVLHRHGGLQMADQDVFINVV
GGVKVEETSADLALLLSMVSSFRDQSLPKDLVVFGEVGLSGEIRPVPSGQERLQEAAKHG
FRRAIVPHANAPKHPIEGMEVVPVKKLADALEAL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaacaaaactgcctatgtttgtaccgaatgtggcgccgacttcacacgctgg
cagggccagtgcagtgagtgcaaggagtggaacaccatcagcgaggtgcgcctcggctcg
gtgaccccgggcaagagcgcccgttataccggttatgccggtgccatcggcagccaggtg
cagacgctggcggagatcgccaccaccgagatcccccgtttctcttccggtttcaaggag
ctggaccgggtcctggggggcggggtggtgccgggctcggcgatcctgatcggtggcaac
ccgggggcgggcaagtcgaccctgctgctgcagaccatgtgcggtctggcggagcggatg
aagaccctctatgtcaccggcgaggagtcgctgcagcaggtggcgatgcgggcctcgcgc
ctcggcctgccgaccgacaagctgcgcatgctgtcggagacctcggtcgagcagatctgc
ctgatagcccagcaggagcagccacagatcatggtcatcgactccattcaggtgatgcat
gtggcggatgtgcagtcggcgccgggctccgtgtctcaggtgcgggaagccgccgccctg
ctgacccgctatgccaaacagaatcatgtcgccatcttcatggtgggccacgtgaccaag
gatggcaccctggccggtcccaaggtactggagcactgcatcgactgctccgtgctgcta
gatggcggccacgactcccgcttccggaccctgcgctcccacaagaaccgcttcggggcg
gtcaacgagctcggtgtcttcgccatgaccgggcagggaatgcgggaggtgagcaaccct
tctgccatcttcctcagccgcggtgaagagcaggcgccggggtcggtagtgatggtgatc
tgggaggggacgcggcccctgctggtggaactgcaggcgttggtggattactcccagctc
tccaacccgcgccgggtggcggtggggatggatcataaccgtctcgccatgttgctggcg
gtgctgcaccgccacggcggcctgcagatggcggatcaggatgtcttcatcaacgtagtc
ggcggggtcaaggtcgaagagaccagcgcggatctggccctgctgctctccatggtctcc
agtttccgggaccaatccttgcccaaggatctggtggtgtttggggaagtggggctgtcc
ggcgagatccggcccgtgccgtccggccaggagcgattgcaggaggccgccaagcatggc
ttccgccgggccatagtgccgcacgccaatgcgcccaagcatcccatcgaaggcatggaa
gtggtgccggtgaagaagctggccgatgccctggaggccttgtaa
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