Aeromonas hydrophila J-1: V469_03835
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Entry
V469_03835 CDS
T03574
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ahj
Aeromonas hydrophila J-1
Brite
KEGG Orthology (KO) [BR:
ahj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahj03016
]
V469_03835
Enzymes [BR:
ahj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
V469_03835
Transfer RNA biogenesis [BR:
ahj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
V469_03835
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJE35095
LinkDB
All DBs
Position
complement(793846..794373)
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AA seq
175 aa
AA seq
DB search
MAKLFFALPAEALAPDLVAWRDQLPWPGQPVPAANLHLTLAFLGEADQLTTTRLMAAVAR
QHCPPLTIALNETGWFGRAKAAWVGPTEWPNELTVLARALRRHGEKLGLGNGEQGYRPHV
TLSRKASEPPAALPAPDFVLQADRFCLYQSLSTPDGVRYEPLACWPLRAREKMAS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactcttctttgccctgcccgccgaggcgctggcacccgatctcgttgcctgg
cgcgaccagctgccctggccgggtcaaccggtgcccgccgccaatctccacctgacgctg
gcctttctcggcgaagcggatcagctcaccaccacccgcctgatggccgctgttgcgcgc
cagcactgcccgccgctcaccatagcgctcaatgaaaccggctggttcggccgcgccaag
gctgcctgggttggcccgacggagtggcccaacgagctcaccgtgctggccagggcgctg
cgtcgccacggcgagaagctggggcttggcaacggcgagcagggctatcgcccccacgtc
accttgtcgcgcaaggcgagcgaaccgccggccgccttgcccgcccccgatttcgtgctg
caggccgatcgcttctgcctctatcaatccctctccaccccggacggggtgcgctacgag
cccctcgcctgctggccgctgcgggccagagagaaaatggcatcctga
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