Aeromonas hydrophila J-1: V469_06540
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Entry
V469_06540 CDS
T03574
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ahj
Aeromonas hydrophila J-1
Pathway
ahj00250
Alanine, aspartate and glutamate metabolism
ahj00310
Lysine degradation
ahj00350
Tyrosine metabolism
ahj00650
Butanoate metabolism
ahj00760
Nicotinate and nicotinamide metabolism
ahj01100
Metabolic pathways
ahj01120
Microbial metabolism in diverse environments
Module
ahj_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
ahj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
V469_06540 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
V469_06540 (gabD)
00310 Lysine degradation
V469_06540 (gabD)
00350 Tyrosine metabolism
V469_06540 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
V469_06540 (gabD)
Enzymes [BR:
ahj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
V469_06540 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
V469_06540 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
V469_06540 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AJE35577
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Position
complement(1378846..1380309)
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AA seq
487 aa
AA seq
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MSASQPALSLIKSLAYIDGRWCEAGGGRRFEVHNPATGQVITQVPDMDEDDTRRAIAAAH
AAQPGWAALTAKERSNRLYAWFELIMANQEELARIMTCEQGKPLAEAKGEVAYGASFIQW
FAEEGKRAYGRTIPGFSSDRRLATIKQPVGVVAAITPWNFPIAMITRKAGPALAAGCTIV
IKPAAETPLCALALAALAEQAGIPAGVINIVTSHQAAAVGNELCNNKTVRKLSFTGSTRI
GKLLMRQCADTMKKLSLELGGNAPFIVFDDADLDAAIAGALASKYRNAGQTCVCANRILV
QAGIYDAFAEKLTAAVKAFKVGDGMSEGTQIGPLINPAAASKVAELVKQATAAGAELLLG
GEAHPAGPLFYQPTILGKVDKTNPILQEEIFGPVAPLVRFDTEAEAIALANDTPYGLAAY
FYGRDIARVWRVAEQLEYGMVGINEGIISTELAPFGGIKESGLGREGAAEGLEEYLETKY
LCFGGIR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatcacaacctgcactctccctgatcaaatcccttgcctatatagatggccgc
tggtgtgaagccggcggcggacgccggttcgaggtgcacaaccctgccaccggtcaggtc
attacccaggtgcccgacatggacgaggacgacacccgccgcgccatcgccgccgcccac
gcagcccaacccggctgggcggcgctcaccgccaaggagcgcagcaaccggctctacgcc
tggttcgaactcatcatggccaaccaggaagagctggcccgcatcatgacctgcgagcag
ggcaagccgctggccgaggccaagggcgaagtggcctatggcgccagcttcatccagtgg
ttcgcggaagagggcaaacgcgcctacggccgcaccattccgggcttctccagcgatcgc
cggctggccaccatcaagcagccggtcggggtggtcgccgccatcaccccctggaacttc
cccatcgccatgatcacccgcaaggcgggcccggcgctggccgccggttgcaccatcgtc
atcaagccggccgccgagaccccgctctgcgccctggcgctggcggcactggcggagcag
gcaggcatcccggccggggtcatcaacatcgtcaccagccatcaggctgcggcggtgggc
aacgagctgtgcaacaacaagacggtgcgcaagctctccttcaccggctccacccgcatc
ggcaagctgttgatgcgccaatgcgccgacaccatgaagaagctgtcgctggagctcggc
ggcaacgcccccttcatcgtgtttgacgacgccgatctcgacgccgctatcgccggcgca
ctcgcctccaaataccgcaacgccggccagacctgcgtctgcgccaaccgcatcctggtg
caggccggcatctacgacgccttcgccgagaagctcaccgccgcagtcaaagccttcaag
gtgggcgacggcatgagcgagggcacccagataggcccgctcatcaacccggccgccgcc
agcaaggtggccgagctggtcaaacaggccaccgccgccggcgccgagctgctgctgggg
ggcgaagcccaccccgccggcccgctcttctaccagcccaccattctgggcaaggtcgat
aaaaccaatcccatcctgcaggaggagatcttcggcccggtggcgcccttggtgcgcttt
gacaccgaggccgaggccatcgccctggccaacgacaccccctatggcctcgccgcctac
ttctatggccgcgacatcgcccgcgtctggcgggtggccgagcagctcgaatacggcatg
gtcggcatcaacgaggggatcatctcgaccgaattggccccctttggcggcatcaaggag
tcgggcctgggccgtgaaggggcggccgaggggctggaggagtacctcgagaccaaatac
ctctgcttcggcggcatccgctag
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