Aeromonas hydrophila J-1: V469_09465
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Entry
V469_09465 CDS
T03574
Name
(GenBank) diguanylate phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
ahj
Aeromonas hydrophila J-1
Brite
KEGG Orthology (KO) [BR:
ahj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahj03019
]
V469_09465
Messenger RNA biogenesis [BR:
ahj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
V469_09465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
DUF4131
Motif
Other DBs
NCBI-ProteinID:
AJE36096
LinkDB
All DBs
Position
complement(2063024..2064664)
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AA seq
546 aa
AA seq
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MLNKLGSNQLLVIALLCAPLLLLQGLWLAFTNTLLTLLIILATSLLGFGLLSMLTLRLQQ
AERSHQEQVWCRALQLRDPTCLTTPEAQAALQQLLAHFNEAERDAHRQISELHNQATQDE
LTQLQNRHAFRRDMTELLQRDQDTQTATLVLIRATELGKLNAQRGFQSGDAYIKDIANII
TRVVSRFPGHQVYRISGADFAVLVQPVANIPPPLLGRDLKIAFDHYQQQHELESAAYSGL
TRLSSGQKIEAILARADLALARAQTETVNGWAIQQDDSVVELQGQHHWKLVLTELLEQER
ISFTYQPIQPMHRSMLAYNEIYTRFSSADGTVLPTDTLFAMAQRLDMVMRLEQMLVTHVM
RQYRAFGSNQSRWGINLSSNLLQNSAFLIWLDRQLLNDPNTSANLVFELDEEHLERNLTG
AKRVFELLRRNGSRSAICNFGKGIGSFNLFRELKPDYIKLDPALITGLEQDLTNQQFVRM
IVDVSHRMGCQVIAEGVEQLGQKQLLQGMYVDGLQGYLIAKPQQLRPDISQLGLFTEDAS
TSTESE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagctcgggagcaaccagctgctggtgatcgctctcctctgtgctcccctg
ctgctgttgcaggggctctggctcgccttcaccaacacgctgctgaccctgcttatcatc
ctcgccaccagcctgctcggctttggcttgctgagcatgctgaccctgcgcctccagcag
gcggagcgcagccaccaggagcaggtgtggtgtcgggcgctgcagctgcgcgaccccacc
tgtctcaccacccccgaggcccaggccgccctgcagcaactgctcgcccacttcaacgag
gccgagcgcgatgcccaccgccagatcagcgagctgcacaaccaggcaacccaggacgag
ctgacccagctgcaaaaccgccacgcctttcgccgcgacatgaccgagctgctgcaacgg
gatcaggacacccagaccgccaccctggtgctgatccgagccaccgagcttggcaagctc
aacgcccagcgcggttttcagtcgggggatgcctacatcaaggatatcgccaatatcatc
accagggtggtgagccgcttccccggccatcaggtctatcgcatctcgggggccgacttc
gcggtgctggtgcagccggtcgccaacatcccgccccccctgctcgggcgggatctgaag
atcgccttcgatcactatcagcagcagcatgaactggagagcgccgcctactccgggctg
acccggctcagcagcgggcaaaagatcgaggccattctggccagggcggatctggcgctg
gcccgcgcccagaccgagacggtcaacggctgggccatccagcaggatgacagcgtggta
gagctgcaggggcagcatcactggaagctggtgctgaccgagctgctggaacaggagcgg
atcagcttcacctaccagccgatccagccgatgcaccgcagcatgctggcctacaacgag
atctacacccgtttcagcagtgccgacggcactgtgctgcccaccgacaccctgttcgcc
atggcccagcggctggacatggtgatgcggctggaacagatgctggtgacccacgtcatg
cgccagtaccgggcctttggctcgaatcagagtcgctggggcatcaacctctccagcaac
ctgctgcaaaacagcgcctttctgatctggctggaccgacagctgctcaacgaccccaac
accagcgccaacctggtgttcgaactggatgaagaacatctggagcgcaacctgaccggg
gccaagcgggtgttcgagctgctcaggcgcaatggcagtcgctccgccatctgcaacttc
ggcaaggggatagggtcattcaacctgtttcgcgagctcaagcccgactacatcaagctg
gatcccgccctcatcaccggactggagcaggatctgaccaaccagcagttcgtgcggatg
atcgtcgacgtgtcacaccggatggggtgtcaggtgattgcggaaggggtggagcagctg
ggtcagaagcagctgctgcagggcatgtatgtggacgggctgcagggctatctcatcgcc
aagccccagcagttgcggccggatatcagccagctcgggctgtttactgaggatgcttca
acttcaacagagtcagaatga
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