Aeromonas hydrophila J-1: V469_17420
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Entry
V469_17420 CDS
T03574
Name
(GenBank) helicase SNF2
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ahj
Aeromonas hydrophila J-1
Brite
KEGG Orthology (KO) [BR:
ahj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahj03021
]
V469_17420
Transcription machinery [BR:
ahj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
V469_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
Helicase_C
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AJE37542
LinkDB
All DBs
Position
complement(3819872..3822973)
Genome browser
AA seq
1033 aa
AA seq
DB search
MLTIGSLVTSGCFYGVGKVVNIFFDKNSATVAFFESPANPYARQIEISIDKLVVTALHDE
TVIYCKHPKNTRWTRGRFGGVRPNGDFLVIFREDEYAVITISDIHVLNKDPNVPLNPAHF
LAYQANDAPFFFPRRQNFIDSYIQQRGACLGIASVSSSAVELEPHQLAVVKRILQDDIPK
YILADEVGLGKTIEAGMIIREHALEKEGRVSMLIAVPQSLIEQWTKELAERFQLKQLIIA
ATVAFELIVEGKCAEGIVVCSYEDACNLLEKGFKPSLVTIDEVHQIASWPWSDNTDEVNN
FYLISEACKFSTYVLLLTGTPLHGHERNFLSMLHCINPDAYQVDEKNLLAFTELVKNRES
LGGMFSALVPSASNISLRRNLDELLAQFPHDSDLFLLCQNLFPLIGRFTPPSPEREVGIR
AIRLHIGERYRIHHRLLRNRRQVSISQDENKNLNLELLFPGLDGVIECHWKTEGLTLDEL
LEEYRALSTQPQNKHWLLKEADYITWIDDLFSSPLCVMEHAKTILRSSSPSHDEQALLEH
IVTTAKNELKAIDSMLVAALNDWLQKFPEGKAIVFCDRPEIAQHLLVKLSIGLEYPIECY
HPGQPLQFSQQQNPVRVLLCDKKGEDGLNLHGGRRLAVHYGLPRSCSRIEQRTGRLNRYS
ANLRGIKPIQSMILKNNATHSLRNRWAEVLVKSIGVFHNTISSLQFVLDEYVGDVWLRLY
QEGPQVLENLAAALPGEHGVLTRETNKINMQEKLLAMDEEVAQAALFAQRLSNEDLLAVG
QCEALIPWITQVLRFRHVGNVEEGMRFRFELGERNSGTLVDFKTFLTTCMLSFDKDGGNP
PSTYLMSAERIPAINGTTVYPLRYGQPFVDSVWRLLNKDARGSSMAILRVVPASLNEPRY
FFQMSWLVTHCDPLSDYAQIRKGDENHPPYILQEWLTIDGTVVTNSQIIELLNKEYSNNE
SPQKNYVDLNLRPSLWQEIEELVSPDDWKEMVERVYGKSLEKLREQTGSESFLQLMAMKG
VIVCSRNILAGVA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgattggttcattagttacttctggatgtttttatggtgttggcaaggttgta
aatattttttttgataaaaattctgcgacggttgctttcttcgaatcgccagcaaatccc
tatgctcgtcagattgaaattagcattgataagcttgtagttacggccctgcatgatgag
acagtcatttactgtaaacatccaaaaaatactcggtggaccagaggtcgttttggtgga
gtgcgacctaatggggattttttagtcatttttcgggaggatgaatatgcggtcattaca
atcagtgatattcatgttttaaataaagatccaaatgtgccgttaaatcctgcacatttc
ctcgcttaccaggccaatgatgcgccattctttttcccccgtagacaaaatttcattgac
tcatatatccagcagcggggcgcgtgcttaggtattgcatcagtttctagtagtgctgta
gagcttgagcctcatcaattagccgttgtaaagcgcatcttacaagatgatataccaaaa
tatattcttgctgatgaagttggtttggggaaaacaattgaagcgggaatgattattcgt
gagcatgctttggaaaaagaagggcgagtgagtatgcttattgcagttcctcaatcactg
attgaacagtggaccaaggaacttgctgagcggtttcagttaaaacaattaattatcgct
gctaccgtagcgttcgaattaattgttgaaggtaaatgtgctgaaggtattgttgtttgc
agttacgaagatgcctgcaaccttttagaaaaggggtttaaaccatcattagtaacaatt
gatgaagttcatcaaattgcttcatggccttggtctgacaataccgatgaagttaataat
ttttatttaatttcagaggcctgcaagttttccacctacgtgcttttgctcactggtaca
cctttgcacggccatgaacgaaattttttgtcgatgcttcattgtatcaatcctgatgca
tatcaggttgacgagaaaaatttgctggcatttaccgaactagtgaaaaaccgtgaaagt
cttgggggaatgttctccgccttggttccctctgcttccaacattagccttcgtcgcaat
cttgatgaattgcttgcgcaatttccacatgacagcgatttattccttctgtgtcaaaac
ctatttcctctaattggccgctttactccaccttcacctgaacgtgaggtcggtattcgg
gctattcgattacatataggtgaacgctaccgtatacaccatcgcttattaagaaaccgc
cgtcaggtttccattagccaggatgaaaataaaaatcttaacctggaacttctcttccct
ggtctggatggtgtgatcgagtgtcactggaaaacagaggggttgacgctggatgaatta
ttggaagaatatcgtgccctttctacacaaccgcagaataaacactggttgctgaaggaa
gcggactatatcacttggattgatgatcttttttccagcccactatgtgtaatggagcat
gccaaaaccatactcaggtccagttcgcccagtcacgatgagcaggctttactggagcac
atcgttacgacggccaaaaacgaactaaaggccatcgacagcatgctagttgctgccctc
aatgactggttgcagaagttcccagagggtaaagcaatagtgttttgtgaccgcccggaa
attgcgcagcaccttttggttaaactgagcatcggcctagagtacccaatagagtgttac
cacccaggccaaccattgcaattttcccaacagcagaatcctgtgcgggttctgttgtgc
gataaaaaaggcgaagatggtttgaatcttcacggtgggcgtcgcctagccgtccactat
ggcttaccgcgttcttgcagtcgtattgagcaacgtactggccgactgaatcgctatagc
gccaacctccgaggcatcaagcctattcaaagcatgatcttgaaaaacaatgcgactcat
agcttacgtaatcgctgggctgaagttctggttaagagcatcggtgtctttcacaacact
atttccagtctgcaattcgtgctggatgagtatgttggtgacgtttggctccggctctac
caggaaggaccacaggttctggagaatcttgctgccgcactgccaggtgagcatggtgtg
ctgaccagagagaccaataaaattaacatgcaggaaaaactgttagccatggatgaggag
gtagctcaagctgcgctcttcgctcagagactaagtaatgaagaccttctcgcagtagga
cagtgtgaagcgttgattccttggattactcaagtattacgttttcgccatgtgggaaat
gtggaggaggggatgcggtttcgttttgaactcggcgagcgcaactcaggcactttggtt
gactttaaaacgttcttgacaacgtgcatgctcagtttcgacaaagatggcggtaaccca
ccatcaacctatctgatgagcgctgagcgcattcctgccatcaatgggacaacagtttat
ccgttgcgttacggtcaaccctttgttgactccgtatggcgccttttgaataaggatgcg
cgaggcagttcaatggccatcctgcgcgttgtacccgcttcactgaatgagcctcgctat
ttcttccaaatgagttggttggtcacccactgcgatccactaagcgattacgcacaaatc
cgaaaaggtgatgagaatcatccaccctacattttgcaggagtggttgacgattgatgga
accgtagttaccaattcacagattattgagttgcttaataaagaatacagtaacaacgaa
tcgcctcaaaaaaattatgtcgacctcaatctacggcctagcttatggcaagaaattgag
gaattggtctccccggatgactggaaggaaatggtcgaacgggtatacgggaaatcgttg
gaaaaacttcgtgaacaaactggcagtgaaagcttcctgcaactaatggcaatgaaaggc
gttatcgtttgtagcagaaatattttagcaggagttgcttga
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