Aeromonas hydrophila J-1: V469_19040
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Entry
V469_19040 CDS
T03574
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ahj
Aeromonas hydrophila J-1
Pathway
ahj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V469_19040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahj03400
]
V469_19040
DNA repair and recombination proteins [BR:
ahj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V469_19040
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
V469_19040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AJE37831
LinkDB
All DBs
Position
complement(4165001..4165708)
Genome browser
AA seq
235 aa
AA seq
DB search
MLTPAFVIHSRPYRETSQLVEVFTQDSGRFTLVARGSRGPRSPLKGLLQPFTLLTIAWRG
KGDLKNLTQVECPDHSLRLGGDRLFYGLYLNELVFYLLEAHTPFPEVFDAYARAIMALAD
GETPELPLRRFEFLLLQALGYAVDFEYAADDESPIQPELLYGFERELGFVACERAPDPRT
LFLGAHLLAFAEGRFDSPPLLQAAKRFSRLALQPYLGRRQLKSRELFLKRRNSQG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaccccggctttcgtcatccacagtcggccctatcgggagaccagccagctggtc
gaggttttcacccaggatagtggccgttttactctggtggctcgcggttcccgcgggcca
cgctcgcctctgaaggggctgttgcaaccctttaccctgctcaccatcgcctggcgtggc
aagggcgatctcaagaatctcacccaggtcgagtgcccggatcactccctgcggctcggc
ggcgatcgcctcttctacggcctctatctcaacgagctggtcttctacctgctggaagcc
cacaccccgttcccggaagtgtttgacgcctatgcccgtgccatcatggcgctggccgac
ggcgagacgccggagctgcccctgcgccgcttcgaattcctgctgctgcaggcgctcggc
tacgcggtggacttcgaatatgccgccgacgacgagtcgccgatccagcccgagctgctg
tacggcttcgagcgtgaattgggctttgtcgcttgcgagcgggcgccggatccccgtacc
ctgtttctcggcgcgcacctgctggcctttgccgaggggcgcttcgacagtccgcccctg
ctgcaggcggccaagcgtttcagccggctggcactgcagccctatctggggcggcggcag
ttgaagagccgggagctgtttttaaaacgccgcaatagccagggttaa
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