KEGG   Acholeplasma hippikon: NCTC10172_00059
Entry
NCTC10172_00059   CDS       T06645                                 
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
ahk  Acholeplasma hippikon
Brite
KEGG Orthology (KO) [BR:ahk00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NCTC10172_00059 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahk03021]
    NCTC10172_00059 (rpoD)
Transcription machinery [BR:ahk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC10172_00059 (rpoD)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_10 HTH_28 HTH_Tnp_ISL3 Exonuc_VII_L HTH_23 DUF722 KORA
Other DBs
NCBI-ProteinID: VEU82054
UniProt: A0A449BHX5
LinkDB
Position
1:59456..60721
AA seq 421 aa
MSMKVALEALVKKAGKKKTLNQSDLESYYPFGTPEYDELEKALLEKEVDVLIDDEDEEEK
EEVKVEIDTDDVDDLEDDEEIDEPDEFSLSSLEVEDIKEEELLNIEQIVSSIKVDDPVRM
YLKEIGQIPLLNIDDERKYAIWVSNGRVAADQLESYKKGEIQLSPEDVFELEEAVRKAHI
AKERLVEANYRLVVSIAKKYTQRGLLFLDLIQEGNMGLMRAVDKFDYEKGFKFSTYATWW
IRQAITRAVADQARTIRIPVHMVETINKMIRIQRQLVQELGREATVEEVAEKMGISPEKV
QNIQRIAKEPISLEAPVGEEEDSSLGDFISDPNALNPHDYMMQEMVKKTLDEVLETLTDR
EEKVLRLRYGLLDGKTHTLEEVGREFGVTRERIRQIEAKALRKLRSPQRQNKLKEFYVAR
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagtatgaaagtagcacttgaagcacttgtaaaaaaagctggtaagaagaaaacttta
aaccaaagcgatttagaaagctattatccatttggtacacctgagtatgatgaacttgaa
aaagctttattggaaaaggaagttgacgtactaatcgatgatgaagatgaagaagaaaaa
gaagaagtaaaagttgaaatcgatactgatgacgtagatgatttagaagatgatgaagaa
atcgatgaaccagatgaattctcactttcatcattagaagttgaagatatcaaagaagaa
gaattattaaatattgaacaaatcgtttcatcaattaaagttgatgatcctgtacgtatg
tacttaaaagaaattggacaaatccctctacttaatatcgatgatgaaagaaaatatgca
atttgggtatctaacggtagagttgcagctgatcaattagaatcatataagaaaggtgaa
atccaactttcaccagaagatgtattcgaacttgaagaagcagttagaaaggctcatatt
gctaaagaacgtttagttgaagctaactatcgtttagttgtttcaattgcgaaaaagtat
acacaacgtggtttattattcctagacttaatccaagaaggtaacatgggattaatgcgt
gcagttgataagtttgattatgaaaaaggatttaagttctcaacatacgcaacatggtgg
attcgtcaagcaatcacacgtgctgttgcagaccaagcaagaacaattcgtatcccagtt
catatggtagaaacaattaataagatgattcgtattcaacgccaattagttcaagaatta
ggtagagaagcaaccgttgaagaagttgctgaaaagatgggaattagccctgaaaaagtt
caaaacattcaacgtattgctaaagaaccaatctctttagaagcaccagttggtgaagaa
gaagactcatcattaggagacttcattagtgaccctaatgcattaaatccgcatgattat
atgatgcaagaaatggttaaaaagactttagatgaagtcttagaaacattaactgataga
gaagaaaaagtattacgccttcgttatggtctacttgatggtaagacacatacattagaa
gaagttggtcgcgagtttggggttacaagagaacgtatccgtcaaattgaagccaaagct
ttaagaaaattaagatctccacaacgtcaaaacaaattaaaagaattctatgttgcaaga
aaataa

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