Acholeplasma hippikon: NCTC10172_00126
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Entry
NCTC10172_00126 CDS
T06645
Symbol
deaD_1
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ahk
Acholeplasma hippikon
Pathway
ahk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10172_00126 (deaD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahk03019
]
NCTC10172_00126 (deaD_1)
03009 Ribosome biogenesis [BR:
ahk03009
]
NCTC10172_00126 (deaD_1)
Enzymes [BR:
ahk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10172_00126 (deaD_1)
Messenger RNA biogenesis [BR:
ahk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10172_00126 (deaD_1)
Ribosome biogenesis [BR:
ahk03009
]
Prokaryotic type
rRNA helicases
NCTC10172_00126 (deaD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
BscB_a-b
DUF2948
Motif
Other DBs
NCBI-ProteinID:
VEU82120
UniProt:
A0A449BI49
LinkDB
All DBs
Position
1:117006..118631
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AA seq
541 aa
AA seq
DB search
MSLLFNDLPILDTTKEALNQLGFTTPTPIQALAIPKMIEGLDLIGQAQTGTGKTFAYAIP
MVEKTDTTKKVTQGLILTPTRELTMQVYKEILKLVKFYPSLKVTTIVGGESYDKQFRELA
KHPHIIVATPGRIIDHIDRKTVDLSNVNTLTLDEADEMLKMGFQEDLERILQSLPEERQT
VLFSATLPAFIKKIASQYQKNPEFLKVEAETLTVDRITQGYFLVKDEDRPNLLVRLLDME
NPKTAIIFANTKADVDKIAASLQDAKFTADALHGDLKQSQRNYVMSRFRNKQLSLLIATD
VAARGLDISDVELVINYDLPQQDEVYVHRIGRTGRAGKKGKAYSFVTPRKRRMIEVLSKF
IKTDIKKLEFPDENAIYKQRIKAFKNELKALMAEEVPNHMELLNEFLTDEQMKDHLLNTL
LNQIVPVKKEYPELAPVVERSRRTETSRNDRRKGEKSDAPKRTGKYEDFIINLGKKDGMT
PQNLFKVLEKEFGIYSKNVGDIKHLSGETIFGIKSEVVNKLRKDKAVNYQGKKVTVKNFK
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttatttaatgatttaccaattttagatacaacaaaggaagcgttgaatcaa
ttagggtttacaacacctacaccgattcaagcattagcaattccaaagatgattgaagga
cttgacttaatcggtcaagcgcaaacaggaacaggaaaaacttttgcctacgcaattcct
atggtcgaaaagactgatacaacaaagaaagttacgcaaggattaatcttaactccaaca
agagaattaacgatgcaagtttataaagaaattttaaaacttgttaagttctacccttcc
ttaaaagtaacaaccattgttggcggagagagttatgataagcaatttagagaattagcc
aaacaccctcatatcattgtagcaacaccaggtcgtattatcgaccacatcgatagaaaa
actgttgatctatcaaatgttaacacattaacattagacgaagcagacgaaatgttgaag
atgggattccaagaagacttagaacgcatcttacaatcattaccagaagaacgccaaact
gtattattctcagcaacattacctgcattcattaaaaagattgcaagtcaataccaaaag
aatccagaattcttaaaagtagaagctgaaacattaacagttgatcgtattactcaagga
tacttccttgtaaaagatgaagatagacctaatctattagttagactattagatatggaa
aatccaaaaacagcaattattttcgcgaacactaaagctgatgttgataagattgctgct
tcattacaagatgctaaattcactgccgatgcattacatggtgatttaaagcaatctcaa
agaaattatgtaatgagcagatttagaaataaacaattatcacttttaatcgcaactgat
gttgctgctcgtggtttagacatctcagatgttgaacttgttattaactatgacttacca
caacaagacgaagtttatgttcaccgtattggtagaacaggccgtgcaggtaagaaaggt
aaagcttactcattcgttacaccacgtaaacgtagaatgattgaagtattatctaaattc
atcaagactgatattaagaagttagaattcccagatgaaaatgcaatctacaaacaaaga
attaaagcatttaaaaatgaattaaaagctttaatggctgaagaagtgccaaatcatatg
gaattattaaatgaattcttaacagatgaacaaatgaaagatcatttattaaatacttta
ttaaatcaaatcgttccagttaagaaagaataccctgaattagcaccagtggtagaaaga
tcaagaagaactgaaacatcaagaaatgatcgtcgtaaaggtgaaaaatcagatgcacca
aaacgtacaggtaaatatgaagactttatcattaacttaggtaagaaagatggtatgaca
cctcaaaacttattcaaagtattagaaaaagaattcggaatttattctaagaatgttggt
gacatcaagcacttatctggagaaacaatcttcggtattaaatcagaagttgttaacaaa
ttaagaaaagataaggctgtaaattaccaaggtaaaaaagttacagttaaaaatttcaaa
cgataa
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