Acholeplasma hippikon: NCTC10172_00189
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Entry
NCTC10172_00189 CDS
T06645
Symbol
deaD_2
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ahk
Acholeplasma hippikon
Brite
KEGG Orthology (KO) [BR:
ahk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahk03019
]
NCTC10172_00189 (deaD_2)
03009 Ribosome biogenesis [BR:
ahk03009
]
NCTC10172_00189 (deaD_2)
Enzymes [BR:
ahk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10172_00189 (deaD_2)
Messenger RNA biogenesis [BR:
ahk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10172_00189 (deaD_2)
Ribosome biogenesis [BR:
ahk03009
]
Prokaryotic type
rRNA helicases
NCTC10172_00189 (deaD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
PhoH
Aldolase
Motif
Other DBs
NCBI-ProteinID:
VEU82182
UniProt:
A0A449BIC0
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All DBs
Position
1:184651..185910
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AA seq
419 aa
AA seq
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MTIQEMLQRLNFSNLSPIQEQVIENFSKSQNIVGLAPTGTGKTHAYLLPLLENIKRKENA
VEAVILIPTNELVMQVSKMLEETDPTVNYKSYYGSMDMEREAKKLENSHPNIVITTPAKL
VDLVITKNALNLKHLDYFILDEADMMFDEDFMSLLDPVLVNQEIQKFMLFSATITRTMEP
FIKKYFGSYIFLDTVKDTKLKINHKLIRVGDSRLKTLQQVIDRINPYLGIIFVSKNEDIK
RVYETLIDKGLNVIQISSEIGVKQRKKILEDIFNNRYQYVVSSDLLARGLDFKASHVINY
DLPYMLEFFKHRSGRTGRMGDEGDVITLFDDNDQKKIDKLRNKGVPFVLYTLSDNGLKST
QRKSKTYDKKIAEEIKKIPKPKRVTPGYKKKHQEEVKAAIKKVKKARYRNAALRKSRGA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacaagaaatgttacagaggttaaactttagtaatttatcgccaatccaagaa
caagtaatagagaatttctctaaatcacaaaacattgtcggattggcaccaaccggtaca
gggaaaacacatgcttacctcttaccattattagaaaatattaaaagaaaagaaaacgca
gtggaagctgttattttaattcctacaaatgaacttgttatgcaagtttctaagatgctt
gaagaaacagatccaacagttaactataagagttattatggttctatggatatggaacgt
gaagcaaagaaattagaaaatagccatcccaatattgtaattacaacgcctgctaaatta
gtagatttagtcattactaaaaatgcgcttaacttaaaacatttagactacttcatttta
gatgaagcagacatgatgtttgatgaagacttcatgagtttattagacccggttttagtt
aaccaagaaattcaaaaattcatgttattttcagcaactattacaagaacgatggaacca
tttattaaaaaatattttggttcatatatattcttagatacagttaaagatacaaaatta
aaaattaatcataaattgattcgtgtaggagattctagattaaaaactttacaacaagtc
attgatcgaattaatccttacttaggtattattttcgtaagtaaaaatgaagatatcaaa
cgtgtttatgaaacattaattgataagggtttaaatgtcattcagatttcatctgaaatt
ggcgttaaacaaagaaagaaaatcttagaagatatttttaataatcgttaccaatatgtt
gtatcaagtgatttacttgctagaggtttagactttaaagcaagtcatgtcattaactac
gatctaccgtatatgttagaattctttaaacatagaagtggtagaacgggtcgtatggga
gatgaaggtgatgtaatcactttatttgatgataacgatcaaaagaaaattgataaacta
agaaacaaaggcgtaccattcgttttatatacattatcggataatggattaaaatcaaca
caaagaaaatctaaaacttatgataagaaaatagcagaagagattaaaaagattccaaaa
ccaaaacgtgtaacaccaggttataagaagaaacatcaagaagaagtcaaagctgcaatt
aaaaaagtaaagaaagcgagatatagaaatgctgctcttaggaagtcacgtggggcttag
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