Acholeplasma hippikon: NCTC10172_00249
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Entry
NCTC10172_00249 CDS
T06645
Symbol
deaD_3
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ahk
Acholeplasma hippikon
Pathway
ahk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10172_00249 (deaD_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahk03019
]
NCTC10172_00249 (deaD_3)
Enzymes [BR:
ahk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10172_00249 (deaD_3)
Messenger RNA biogenesis [BR:
ahk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10172_00249 (deaD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
Utp25_C
P-loop_SecA
Shikimate_DH
AAA_22
CheB_methylest
Motif
Other DBs
NCBI-ProteinID:
VEU82241
UniProt:
A0A449BIF5
LinkDB
All DBs
Position
1:253668..255023
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AA seq
451 aa
AA seq
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MNTFSNLGLNEKIAKSVAFVGYTEPTPIQVEAIPHLLAKKDLLGSAQTGTGKTAAFALPI
LQHIYESLDFTKPRKIEALILAPTRELATQIGENFTKYSKFINIKNTIIYGGVSQKKQEE
ALRKGVDILIATPGRLMDLMEQKIVKLDHVKYLVLDEADQMLDMGFIKDIKKIISHIPKE
RQSMLFSATMPKEIEKLATEMLVDPVRIAVAPVTQTLDIISQRVYHVKKKQKINLLAHLL
ETENMKRVLIFVRTKRNADRLVKNLAELNIHAEPIHGNKSQAARDRALLNFKTGKTKILV
ATDVASRGLDISGLDYVFNYELPEIEETFIHRIGRTGRAGKAGEAIAFVSDEEKDLLKDI
EKHINLKLQVFPHPFMDEKEKEVVKDVKTTKETKKNPSNKKNDQKKKVEKQPDYLRFRGY
DPKKKKNSKKKSDSFEQYKKKKNPYYQSKSK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatttagtaatttaggtttaaatgaaaaaatagcaaagtcagtggcatttgtt
ggttatactgaaccaacaccaatacaagttgaggcaattccacatttattagcaaagaaa
gatttattaggaagtgcccaaacaggaacaggtaaaactgcagcttttgcgttaccaatt
ttacaacatatctatgaatctttagattttacaaaacctcgtaaaattgaggcattaata
ttagccccaacaagagagttagcaactcaaattggtgaaaacttcaccaaatattcgaag
tttattaatatcaaaaacacaataatttatggcggagttagccaaaagaaacaagaagaa
gcacttagaaaaggtgttgatatcttaattgctactccgggtcgattaatggatttaatg
gaacaaaaaatagttaaattagaccatgtgaaatatttggttttagatgaagcagatcaa
atgcttgatatggggttcatcaaagacatcaaaaaaattattagtcatattccaaaagaa
agacaatcaatgttgttttctgcaactatgccaaaagaaattgaaaaattagctacagaa
atgttagttgatccagtaagaattgcggttgcacctgtaactcaaacattagatattatt
tcacaacgtgtatatcatgttaaaaagaaacaaaagataaatttattagcacatttactt
gaaactgaaaatatgaaacgtgtcttaattttcgttagaacaaaacgtaatgcagaccgt
ttagttaaaaatttagctgagttgaacattcatgcagagccaattcatggtaataaatca
caggctgcacgtgacagagcattacttaattttaaaacaggaaaaactaaaatcctggtt
gcaactgatgttgcatctcgtggattagatattagtggactagactatgttttcaattat
gaacttccagaaattgaagaaacatttattcatcgtataggtagaactggtcgtgctggt
aaagcaggtgaagcaattgcctttgtcagtgatgaagaaaaagatttattaaaagatatc
gaaaaacatatcaatttaaaacttcaagtattccctcacccattcatggatgaaaaagaa
aaagaagttgtaaaagatgtgaaaacaacaaaagaaacaaagaagaatccttcaaataaa
aagaacgaccaaaagaaaaaggttgaaaaacaaccagattacctaagatttagaggatat
gatcctaaaaagaaaaaaaattcaaagaaaaagtcggattcttttgagcaatataagaaa
aagaaaaatccttattatcaatcaaagagtaaataa
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