Acholeplasma hippikon: NCTC10172_00880
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Entry
NCTC10172_00880 CDS
T06645
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ahk
Acholeplasma hippikon
Pathway
ahk03030
DNA replication
ahk03430
Mismatch repair
ahk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10172_00880 (dnaE)
03430 Mismatch repair
NCTC10172_00880 (dnaE)
03440 Homologous recombination
NCTC10172_00880 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahk03032
]
NCTC10172_00880 (dnaE)
03400 DNA repair and recombination proteins [BR:
ahk03400
]
NCTC10172_00880 (dnaE)
Enzymes [BR:
ahk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10172_00880 (dnaE)
DNA replication proteins [BR:
ahk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10172_00880 (dnaE)
DNA repair and recombination proteins [BR:
ahk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10172_00880 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
DUF6331
EF_EFCAB10_C
T2SSK
Motif
Other DBs
NCBI-ProteinID:
VEU82854
UniProt:
A0A449BK81
LinkDB
All DBs
Position
1:complement(892988..895927)
Genome browser
AA seq
979 aa
AA seq
DB search
MKKVIGTLYTKTEYSMLNSTLQLEALFSLHKERGYDFISLVDDNLHALYKFLKLSEKYQI
KSIIGLDIKLNFREMNLNFLVYARNDKELKILTKLATKKEVSDELNFADVISDLKELVVV
IPSFQSYILNNYANKELLTEIFKYLKERIKSFYIGVSNQSELLTNVTTYLKEIARELEIG
LLPTRKISYANKEDQKTYHVLRKIENNLYEESYEDLSLITKQDLIKEYKKEHGIFDFQYE
VFKNTKYTYLNNKFELPKYPTKDNVDAKSYLEALAKLGLKKRLEKIEHKNEKVYQDRLVH
ELNVIDQMGYNDYFLIVYDFVKFAKTNDILVGPGRGSAAGSLVAYCLGITEVDPIQYDLL
FERFLNIDRRTMPDIDLDFPDNKRDLVIDYVKNKYGEKHVVTISTFTTFAEKSSIRDIAR
ILKLDNSRTTAIINAMQKNKLDETDYEAIELISVAKTLEGLPRQTGTHAAGIILSKENLD
DFVPLQKGPHDMLQSQLEASDLESLGFLKIDFLGLRNLAIIDEIYKLEKIDTKLSDIPLD
DKKTFETLKNVETTGIFQLESYGMKNVIRKLKPETFEDIVALLALFRPGPMDFIDSYIKS
RHGGGFELVDPSIDEVLKPTFGIIVYQEQIMKIAQMFAGYSLSQADLLRRGIAKKDKEIL
EKEKSNFVKKAIENGRDEKVALKIYDYIERFADYGFNRSHSVAYALLAYQMAYLKTHYFQ
TFMSVLLSSVTSNTELVENYVKEVRSKKYDVLKPDIRYSTDKFIKTKYSILSPLLLIKGL
GVNTVEKILEERAKGPFKDYNEFKVRMKGILNEKNLISLIHAGALDSFGLTHATMLASTN
LNQTGFENFLDDYKEKEFSELDFEILKAHEKEAIGFNLYYVMDLTFKTLTEKYGLENPDF
TKNQVKFIGKVLKVKTIKTKQNANMCFVDFDCGKEEISATIFPKEYNDYVKLLDEKYLLV
YASSSEKGYIVNKIEKVKV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagtgatcggaacgttatatacaaaaactgaatatagcatgctgaatagtaca
cttcaattagaagcgcttttttcattgcataaagaacgtggatatgacttcatttcattg
gtagatgataatctacatgctttatataaatttttgaagttaagtgaaaagtatcaaata
aagtcaattattgggttagatattaaacttaattttagagaaatgaatttaaatttctta
gtttatgcaagaaatgataaagagttaaaaattttaactaaacttgcaacaaaaaaagaa
gtaagtgatgagttaaactttgctgatgtgattagtgatttaaaagagttggttgtagtt
ataccaagtttccaaagctatatattaaataactatgcgaataaagaacttttaactgaa
atttttaaatatttaaaagaaagaataaaatcattctatattggcgtttcaaatcaaagc
gaacttttaacaaatgtaacaacgtatttaaaagaaattgctagagaattagaaattggt
ttactacctacaagaaaaataagttatgcaaataaagaagatcaaaaaacatatcatgtc
ttaaggaaaattgaaaataatttatatgaagaatcatatgaagatttaagtttaattact
aaacaagacttaataaaagaatataaaaaagaacatggaatttttgactttcaatatgaa
gtctttaaaaatacaaaatatacttatttaaataataaatttgaattaccaaaatatcca
acaaaagataatgttgatgcaaaatcttacctagaagcattagcaaaattaggtttgaag
aagcgcttagaaaaaattgaacataaaaatgaaaaagtataccaagatagattagttcat
gagttaaacgtgattgatcaaatgggttataatgattacttcttaattgtttatgatttt
gttaagtttgccaaaacaaacgatatcttagttggtcccggacgtggtagtgcagccgga
agtttagttgcatattgtttaggaatcacagaagttgatcctattcaatatgatttatta
tttgaaagatttttaaatattgatagaagaacaatgcctgatatcgatttagactttcca
gataacaaacgtgatttagtgattgattatgttaaaaacaaatatggtgaaaaacatgtt
gttacaatttcaacattcaccacatttgctgaaaagtcttcaattagagatattgcaaga
atcttaaaattagataattcaagaacaaccgcaattatcaatgcgatgcaaaaaaataaa
cttgatgaaacggattatgaagcaattgaattaattagcgtggcaaaaacattagaagga
ctcccacgtcaaacaggaacccatgcagcaggtattattttatctaaagaaaatttagat
gattttgttccgctacaaaaagggcctcatgacatgcttcaatcacaactagaagcaagt
gatttagaatcattaggttttttaaagattgatttcttaggcttgagaaacttagcaatt
attgatgaaatttataaactagaaaagatagatacaaaattatcggatattccgcttgat
gataaaaaaacctttgaaactttaaagaatgtagaaacaacaggtatttttcaactagaa
agctatggcatgaaaaatgtcattagaaaattaaaaccggaaacctttgaagatatcgtt
gctttactcgcattatttagaccgggtccaatggattttattgattcatacattaaaagt
cgccacggtggtgggtttgagttagttgacccatcaattgatgaggttttaaaaccaacg
tttggtattatcgtatatcaagaacaaatcatgaaaattgctcaaatgtttgcaggatac
tcattaagccaagctgatttgctacgtcgtggaattgctaaaaaagataaagagattcta
gaaaaagaaaaatctaattttgttaaaaaagcaattgaaaacggaagagacgaaaaggta
gcgttaaagatttatgattatattgaacgctttgctgattatggttttaatagaagtcac
tcagtagcttatgcccttttagcatatcaaatggcatatttaaaaacacactacttccaa
acatttatgtctgttctcttaagcagtgtcacatcaaacactgagttggtagaaaactac
gttaaagaagttagaagtaaaaaatatgatgttttaaaacctgatattcgttatagtacc
gataaatttattaaaacaaagtatagtattctttcccccctattattaattaagggtctg
ggtgttaataccgttgaaaagatcttagaagaaagagcaaaaggtccatttaaagattac
aatgagtttaaagtaagaatgaagggaatcttaaatgagaagaatttaatttcacttatt
catgctggtgcactagattcatttggattaacgcatgcaaccatgttagcatcaaccaat
cttaatcaaacaggatttgaaaacttcttagatgattataaagaaaaagaattttctgaa
ttagattttgaaatcttaaaagcacatgaaaaagaagcaattggatttaatctatattat
gtgatggatttaacttttaaaacactcacagaaaaatatggtttagaaaacccggatttt
actaagaatcaagttaaattcattggaaaagtcttaaaagtaaaaactattaagacaaaa
cagaatgcgaacatgtgttttgtcgattttgattgcggaaaagaagaaataagtgctaca
atattcccaaaagaatataatgactatgtaaaactgttggatgagaagtatttattagtt
tatgcttcatcttctgaaaaaggatatatagttaataaaatagagaaagttaaggtgtag
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