KEGG   Acinetobacter haemolyticus: AHTJS_08045
Entry
AHTJS_08045       CDS       T04618                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ahl  Acinetobacter haemolyticus
Pathway
ahl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ahl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AHTJS_08045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahl03021]
    AHTJS_08045
Transcription machinery [BR:ahl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AHTJS_08045
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 PhyR_sigma-like HTH_23 HTH_40 TBC1D_hel Phage_antitermQ Terminase_5 HTH_17 HTH_3 DUF627 SapB_1 STATB_N HTH_28 T26-6p_Ig-like_dom HTH_11 HTH_29
Other DBs
NCBI-ProteinID: APR70336
LinkDB
Position
complement(1642369..1642896)
AA seq 175 aa
MIVNKNPILVDELYRNHSGWLHHWLRKKIGSSEQAADLVQDTFIKILQTRDELLGVKEPK
AYLTSIAKNLLIDQVRRKRIEQAYLDGLSEMEYMLDAVVSPEEQVQIIQAIHQLCKALEA
VSEKAQQAFILHYLEGYTHKETAEKLGVSTKMIQKYLASCLVQCYQTRMDMDVLV
NT seq 528 nt   +upstreamnt  +downstreamnt
atgattgtgaacaaaaacccgatactcgttgatgaattatacagaaaccatagcgggtgg
cttcatcattggctgcgaaagaaaattggaagttctgagcaagctgctgatttagttcaa
gatacatttattaaaatccttcagacacgagatgagttgttgggcgtcaaagaaccaaaa
gcttatttgacttcaattgcgaaaaatttattgatcgatcaggtacgacggaaaagaatt
gagcaagcgtatcttgatggtttgagtgaaatggaatacatgcttgatgcagttgtttct
cccgaagagcaggtgcaaatcattcaagcaattcatcagttatgcaaagcattagaagcg
gtctctgaaaaagcccaacaggcttttatcttgcattatttagagggttatacgcataaa
gaaacggctgaaaaactcggtgtttcgaccaaaatgatccaaaagtatttggccagttgt
ttggtacagtgctatcaaacccgaatggatatggatgtgttggtttaa

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