KEGG   Acinetobacter haemolyticus: AHTJS_13060
Entry
AHTJS_13060       CDS       T04618                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ahl  Acinetobacter haemolyticus
Pathway
ahl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ahl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AHTJS_13060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahl03021]
    AHTJS_13060
   03019 Messenger RNA biogenesis [BR:ahl03019]
    AHTJS_13060
Transcription machinery [BR:ahl03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AHTJS_13060
Messenger RNA biogenesis [BR:ahl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AHTJS_13060
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Sulfotransfer_1 AAA_22 NACHT AAA_25 S1CSD-TOTE-2 OB_RNB AAA GpA_ATPase
Other DBs
NCBI-ProteinID: APR71193
LinkDB
Position
2670103..2671371
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVVASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMDEDNLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
AN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacttaactgaactcaagaaaaaacccattggcgaactcattaaaattgcggagttt
atgggccttgaaggcatggcacgtaaccgcaaacaagatattatttttgctattttaaaa
cgccatgcgatgaatggcgaagaaatttttggtgatggcgttctcgaaatcctttctgat
ggttttggttttttacgctccgctgctggttcatatttagctggaccagatgacatttat
gtcagtccatcccaaattcgtcgttttaacttacgtacaggtgacacgatcactggtacg
attcgcccaccaaaagaaggtgagcgttactttgccttattaaaagtcaaccaaattaat
tacgacacacctgaaaactcacgtaataaaattttattcgaaaacttaacacctctattc
ccaaccgaacaacttgttatggagttggggaatggtacaactgaagatttaacagcacgt
gttgtggatttagttgctccaatcggtaaaggtcaacgttcaatcattgttgcaccgcct
aaagcgggtaaaaccatgttattacagaacatcgctcaatcgatcgtccgtaataatcca
gaagtttttcttatcgtacttttaatcgacgaacgtcctgaagaagtaacagaaatggaa
cgtactgtccgtggtgaagtggttgcatctacatttgatgaagcacctgctcgtcacgta
caagttgcagaaatggtcatcgaaaaagcaaaacgtttagtcgagcataaaaaagatgtc
gtgattctgcttgactcgattacacgtctagctcgtgcatacaacaccgtgattccatct
tcaggtaaagtcttgacgggtggtgtagatgcacacgcattagaacgaccaaaacgtttc
tttggtgcagcccgtaatatcgaagaaggtggttcactcaccatcatctctactgctttg
atcgaaactggcagtaaaatggatgatgtgatctatgaggaattcaaaggtacaggtaac
caagagatcacacttgatcgccgtattgctgaaaaacgcgttttccctgcgatgaatatc
aaaaaatcaggaacacgtcgtgaagaacgcctcatggacgaagataaccttcgtaaagta
tggattctccgtaaactgcttcacccaatggatgagttagcagcaatggagttcttacta
gatcgcatgaaagaaaccaaaaccaatgatgacttttttgatcagatgaaacgcaaagca
gcaaactaa

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