Acinetobacter haemolyticus: AHTJS_15055
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Entry
AHTJS_15055 CDS
T04618
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ahl
Acinetobacter haemolyticus
Pathway
ahl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AHTJS_15055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahl03021
]
AHTJS_15055
03400 DNA repair and recombination proteins [BR:
ahl03400
]
AHTJS_15055
Enzymes [BR:
ahl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AHTJS_15055
Transcription machinery [BR:
ahl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AHTJS_15055
DNA repair and recombination proteins [BR:
ahl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AHTJS_15055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
APR71536
LinkDB
All DBs
Position
complement(3065817..3070010)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSEGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIDLASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLTDEEYYNALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEIARLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGKVAIHARVKVRVHQTVIDENGEREQQTIIVDTTPGRCLLWEVVPQGLSFDMINLE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKQTIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTAGGLVMTPFIQGGDVIEPL
RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVC
ARCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILLKDGETVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVVVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELHND
FSEVDQAFSQALNSDQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaagaaaacggattcagaaggtcatgcacccgtt
gaatttgaccgtatccgtattggtcttgcgtcgccagagatgattaagtcatggtctcac
ggtgaagttaaaaagcctgaaaccattaactaccgtacttttaaacctgaacgtgacggt
ttgttctgtgccaaaatttttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagttacaacagca
aaagttcgtcgtgagcgtatgggtcatattgaccttgcatcaccagttgcacatatttgg
ttcttgaaatcattaccgagccgtatcggtttacttcttgatatgacattacgtgatatc
gagcgtgtattgtatttcgaatcttatgttgttactgatcctggtatgactccgtttgaa
aagtatcaacttttaacagacgaagaatactacaatgcacttgaagaacacggtgatgaa
ttcactgcgaaaatgggtgcagaagcagttcaggatttattaaaagatatcgatcttgaa
gctgagattgctcgtttacgtgaagaaattccgcaaacaacttctgagacgaaacttaaa
aaagcgtctaagcgtttgaagttgatggaagcattcaaagattcgaacaataagcctgaa
tggatggtgatgaacgtacttcctgtacttccaccagacttacgtccgcttgtaccactt
gaaggtggtcgtttcgcgacttcagacttgaacgatttatatcgtcgtgtgatcaaccgt
aacaaccgattgaagcgccttcttgaccttgctgcgccagacattatcgtacgtaacgaa
aaacgtatgttacaagagtctgttgatgcgttgcttgataatggtcgtcgtggtcgtgcg
attacaggttcgaacaaacgtccattgaaatctttggcagatatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacttgttaggtaagcgtgttgactattctggtcgttcggtaatt
actgtaggtcctactttacgtctgcatcaatgtggtcttccgaagaagatggcacttgaa
ttattcaagccatttattttcgcgaaattacaagcttcaggtcaggcgactaccattaaa
gctgcgaagaaaatggttgagcgtgagacgccagaagtttgggacgttcttgcttccgtg
attcgtcaacatccagtgatgttgaaccgtgcgccaacacttcaccgtttgggtcttcaa
gcgtttgaacctattctgatcgaaggtaaggcgatccgtcttcacccactcgtatgtgct
gcgtttaacgctgacttcgatggtgaccaaatggcggtacacgttccattgacacttgaa
gcacagctagaagcgcgtgcgttgatgatgtcaacaaacaacatcttgtcaccagccaac
ggtgagccaatcatcgttccttctcaggacgtagtcttgggtctttactacatcacgcgt
gatgcggtaaatgccaaaggtgaaggcatggtgtttgctgatactcacgaagtgaaccgt
gcgttggcgactggtaaggttgcgatccatgcacgtgttaaagtacgtgtacaccaaact
gtaattgatgaaaatggtgagcgtgaacaacaaacgattattgttgatacgacacctggt
cgttgcttgttgtgggaagttgttccacaaggtttaagctttgatatgatcaaccttgag
atgaccaagaaaaacatctcgaagttaatcaactcttgctaccgtaagcttggtttgaaa
gacactgttatcttcgctgaccaattgatgtatttgggcttccgtcaagcgacgcgctca
ggtgtatctgttggtatggaagacatgttaattccaccaaccaagcaaacgattatcgat
aaagctgaaaccgaagttcgtgaaattgaacaacagtttgagcaaggtttcgtaaccgca
ggtgagcgatataacaaagtggtcgatatttgggcacgtaccaatgaccaagttgctaaa
gcgatgatggataacttgtcttatacacttgttaaaaacaagcaaggtgaagatgagaag
cagaaatcattcaacagtatctacatgatgtctgactcaggtgcccgtggttcggcagct
cagattcgtcagcttgcaggtatgcgtggtttgatggcgaaaccagacggttcgattatt
gaaaccccaattaaagcaaacttccgtgaaggtttgacagtacttcagtacttcatctcg
acacacggtgcacgtaaaggtttggccgatacggcattgaaaactgcaaactctggttac
ttgactcgtcgtcttgtagacgtagcgcaagacttggtaattactgaacctgactgtggt
acagccggtggtttagtgatgactccgttcattcagggtggtgatgtcattgagccatta
cgtgaccgtgtattaggtcgtgtaacagctgaagatgtacgtcgtgcttctgatgatgaa
gtggtattacctcgtggtacgctcattgacgagaaaatcgctgctcagcttgaagaagcg
ggtgtcgatgaagttaaagtacgttctgtaatcgcttgtgaatctacattcggtgtgtgt
gcacgttgttatggtcgtgacctagcacgtggtcacttggtgaatccaggtgaatcagtc
ggtgtaatggctgctcagtcaattggtgaacctggtacacagttaacgatgcgtaccttc
cacgttggtggtgctgcgagccgaacttctgctgcgaacagcgttcaagtacgtaacaaa
ggtactgtacgtttccacaatgtgaaaactgtacaacatgccaaaggtcacttagtgtca
gtttctcgttcaggtgaaattggtattgcggatgacttaggtcgtgagcgcgagcgttat
aaacttccttacggtgcaagcatcttattgaaagatggtgagactgtagaagctggcggt
atcgtagcgacttgggatccacatacccacccacttgttacagaagttgcgggtaaagca
cgtttcagccaaatcgctgatggtgtaactgcaacctctaagactgatgatgcaacaggt
atgacgactgttgaaatcttgccagtaacagcacgtcctgcgtctggtaaagatttacgt
cctgcgatcgtgttggatacaacagatggcggcgaacagttctacttcttgccacaaaat
acaatcgtgactgtccgtgatggcgaaacgattggtgtgggtgatgtaatcggtcgtgta
ccacaagaatcttcacgtacgcgtgatattaccggtggtcttccacgcgttgcagacttg
tttgaagcacgtaaaccaaaagagcatgcgattttggcagaagtgtctggtatcgtaagc
tttggtaaagagaccaaaggtaagaaccgtttagtgattacacctgatgatggttcagag
atctacgaagagttgattcctaaatggcgtcaaatcaacgtgttcgagggtgagcatgta
aaccgtggtgaaaccatttctgatggtccacaaaacccacatgacatcttacgtttgaaa
ggcgaagtggctttaacaaactacatcgtgaacgaagttcaagatgtttaccgtctccaa
ggtgtaaaaatcaacgataagcatattgaagttgttgtacgtcaaatgttgcgtaaagtt
gatattactgatggcggcgatacaagcttcatcaaaggtgagcaagtggattacatccgc
gttgttcaagagaaccaagctgtcttggctcagaacaagttccctgcgaagtttgaacgt
cagttaatgggtattaccaaagcatcgctgtctactgactcattcatctctgctgcatcg
ttccaggaaaccacacgtgtgttaactgaagcggctgtaacaggtaaagaagatgactta
cgcggcttgaaagaaaacgttgttgtgggtcgcttgatcccagcgggtacaggtcttgcg
tatcacttagagcgtcgtcgtcaagaagcagaagctgctgaatttgaacttcataatgat
tttagtgaagttgaccaagcatttagtcaagcgttgaactcagaccagttctaa
DBGET
integrated database retrieval system
