Actinoalloteichus hymeniacidonis: TL08_00355
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Entry
TL08_00355 CDS
T04472
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TL08_00355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahm03400
]
TL08_00355
Enzymes [BR:
ahm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TL08_00355
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TL08_00355
DNA repair and recombination proteins [BR:
ahm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TL08_00355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AOS60919
UniProt:
A0AAC9HKG9
LinkDB
All DBs
Position
80439..81371
Genome browser
AA seq
310 aa
AA seq
DB search
MHPAVRCRVFGAAIAPRRAHTGRVPELPEIAAIVHFLREHAVGRTVTRVDIVSLAALKTA
SPPWTELHGREVRDVERHGKFLDLDCGGLHLVVHLARAGWLRWADTLPAAPPRPGRSPLA
VRVHLGPPGSDPGFDLTEAGTRKGLAVWVVHSPAEVPPIAQLGPDAPGLDRAQLGELLSG
RTERLKTVLTTQSVLSGLGNAYSDEVLHVARLSPFATAGRLTEIEIDRLHEAIQTVLADA
VHRSIGLEVARLKGEKRSGLRVHGRTGLPCPVCADTIREVSFSDRAFQYCPTCQTNGKLL
ADRRRSKFIK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcatccggccgtgcggtgtcgggtcttcggcgctgccatagcgccgcgtcgggcccac
actggcagggtgccggagctgcccgagatcgccgcgatcgtccactttctgcgcgagcac
gcggtgggacgcacggtgacgcgggtcgacatcgtgtcgctcgccgcgttgaagaccgcc
tccccgccgtggacggagcttcacggccgggaggtccgcgacgtcgagcggcatggcaag
ttcctcgatctcgactgcggcggcctgcacctggtggtgcatctggccagggcgggctgg
ttgcgctgggccgacaccctgcccgccgcaccaccgaggccgggccgttcccccttggcc
gtccgggtgcacctcggcccgcccggttcggatcctggcttcgatctcaccgaggcgggc
actcggaagggcttggccgtctgggtggtgcacagccccgccgaggtgccgccgatcgcc
cagttgggtcccgatgcgccggggttggatcgagcgcagcttggggagctgctgtccggg
cgcaccgagcggttgaaaacggtgttgaccacccagtcggtgctgtccggtctcggcaac
gcctattcggacgaggtgttgcacgttgcgcggctctcacccttcgcgaccgccggtcgg
ctcaccgagatcgagatcgaccgactccacgaggcgatccagacggtgttggccgatgcg
gtgcaccggtcgatcgggctcgaggtggcgcggctgaaaggcgagaagcggtccggcctg
cgggtgcacggccgaaccgggctgccctgtccggtgtgtgcggacaccatccgcgaggtg
tcgttctcggatcgcgccttccagtactgcccgacctgccagaccaacggcaagctgctg
gccgaccggcgacgctccaagttcatcaagtag
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integrated database retrieval system
