Actinoalloteichus hymeniacidonis: TL08_04230
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Entry
TL08_04230 CDS
T04472
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ahm
Actinoalloteichus hymeniacidonis
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahm03400
]
TL08_04230
DNA repair and recombination proteins [BR:
ahm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TL08_04230
Archaeal homologous recombinant proteins
TL08_04230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
ABC_tran
TsaE
NACHT
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AOS61676
UniProt:
A0AAC9HM26
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All DBs
Position
872828..875944
Genome browser
AA seq
1038 aa
AA seq
DB search
MRLHRLAMTAFGPYRNTVQVDFDALGADGLFLLHGETGAGKTTLLDGVAYALFGQVPGAR
GQVRRLRCDQAPDTVATRVELEVTIQGHRLRIVRSPEFERRKKRGEGTTTVQAKVSLAWL
GGVPDGYPDGLSRIDEVARTVSRLLGMTHQQFFQVVLLPQGEFARFLRADTDEREQLLEQ
LFGTQRFAETEKWFRERRTARFNDVQNARRGVEQLLARIAQAAGVEPPSVEQPTGRWVEE
LTRQAADQRQSAQEAVAATTDQRRRAEQTAVAGHRLATAIARRTELLARLARLDEQHETR
LAWTAELAAARAAAPVAAENDERIRAEADLRHRRDRAEKTRHTAIAAVDESTASGDSALH
RMLSSADLVAALGDADADIPADQSVVAADGGSEPDGTARRGLEKRVVVELREFAAARRES
AGALTSLVDEAALQQPDRSRSVEMASTREKTEMALAESERRAEQLPVELAGVRTQLEESA
TAAAAVPGIRARRDELIELTASARELPGAEQRLAAAEAARASAVDAHQTARDLLLDLREQ
RLSGMAGELAGALVAGEPCAVCGSPEHPVPAEHAALVTDAQERAAVRAEQVASAEREAST
AARQECLHARDALVTQLAGRSESTLSSALAETETELDAAEKLAAVHQRRTDQLAVLEAES
AESQRRRAALQSELASIRSEEAHLNRVIAERSDRLTTAAGGYPDVAARRGALLRAAELVD
ELADRLSAVVEAIDRLAARRHRVAVVVTEAGFDDLADALESARDEASIGKLDEALRQADR
DEAALRAELADPEVVAAENSTPPDLAALDSTADEARRAAEEAVARLRAAEAADSELADLL
GRWTVAERELAPIEADYATLDALTDVVNGRGQNNRKMSLRSYVLAARLEEVAVAATRRLQ
RMSQGRYSFVHSDAAGSRGKRGGLWLDVIDDYSGRARSAKTLSGGESFLASLALALGLAD
VVAAETGGALLDTLFVDEGFGSLDADTLDLVMDTLDELRAGGRVVGLVSHVEELRQRIPT
RLRVRRSRTGSTLEMEMA
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcttcatcggttggcgatgacggcgttcggaccgtaccggaacacggtgcaggtc
gacttcgatgcgctcggcgccgatgggctcttcctgctccacggcgagacgggcgcgggt
aagacgacgctgctcgacggggtcgcctatgcgttgttcggacaggttcccggcgccagg
ggacaggtgcgcagactgcgctgtgatcaggcgcccgacaccgtggcgaccagggtcgaa
cttgaggtgacgatccaggggcaccggctgcgcatcgtccgtagtcccgagttcgagcgg
cgcaagaagcggggcgagggcaccaccaccgtgcaggcgaaggtctccttggcttggctc
ggcggtgttccggacggctatccggatggattgagccggatcgacgaggtcgccaggacg
gtcagcaggcttctcggtatgacccaccaacagttcttccaggtggtgttgctgccacag
ggcgagttcgccaggttcctgcgcgccgataccgatgagcgggaacaactgctggaacaa
ctcttcggcacccagcggttcgccgagaccgagaagtggtttcgcgaacgccggaccgcc
cggttcaacgacgtccagaacgcccgtcgcggggtggagcaactgctggcccggatcgcc
caggcggcaggcgtcgaaccaccctcggtcgagcagccgacgggccggtgggtggaggag
ctgacacggcaggcggccgatcaacgacagtcggcccaggaggccgtggctgccaccacc
gatcagcgacggcgggccgagcaaaccgccgtagccgggcatcggctcgcaacggcaatc
gccaggcggaccgagctactggcccgccttgcgcgactcgacgaacagcacgagacgcgt
ctcgcgtggacggccgaactcgccgcggctcgcgccgcggccccggtggccgccgagaac
gacgaacgcatccgggccgaggcagaccttcgacaccgccgtgaccgtgcggagaagacc
cggcacaccgccatcgccgccgtcgacgaatcaacagcgagcggcgattcggcactccat
cggatgctctcgagtgccgacctcgtcgctgcactcggcgacgccgatgccgacataccc
gccgatcaatcggtggtcgccgcagacggcggtagcgagcccgacggcaccgcccgccgg
ggcctcgaaaagcgggtggtcgtcgaactacgcgaattcgccgctgcacgaagagagtcc
gcgggcgccctgacgagcctggtcgacgaggcggcgctgcaacaacccgaccgttcgcga
tcggtcgagatggcctcgacccgcgagaagaccgagatggccttggccgagtcggaacgc
cgagcggagcagttgcccgtcgaactcgccggggtgcggacccaactggaggagtcggcg
acggctgcggcggctgtgccgggaatccgcgctcgacgagacgagctgatcgagttgacc
gcttcggcacgggagctgccgggcgccgaacagcggttggcggcagccgaagcagccaga
gcctcggcagtcgacgcccatcagaccgcccgtgacctcctgctcgacctccgagaacaa
cggctgagcgggatggcgggcgaactggcgggtgcgctggtcgcgggtgagccctgcgcg
gtctgcggatcgccggagcaccccgtcccggctgaacacgccgccttggtgaccgacgct
caagaacgagcggcggtccgcgccgaacaggtcgcatccgctgaacgggaggcctcgacc
gcggcccgccaagagtgtctgcatgccagggatgctttggtgacgcagttggccgggcgt
tccgaatccacgttgagctcggcactcgccgaaacggagacggaactcgacgcggccgag
aaactggccgcagtccaccagcggcggaccgatcagctggctgttctcgaggccgagtcg
gccgagtcgcagcggcgccgagcggcgctgcagagcgagctggcctcgatacgcagcgaa
gaggcgcatctgaaccgggtcatcgccgagcgttccgatcggttgaccacggcggcgggc
ggctatccggatgtcgcggcccggcgcggcgccctgctacgcgccgccgaactggtcgac
gaactggccgaccgcttgagtgccgtggtcgaggcgatcgatcggttggccgctcgcaga
caccgggtggccgtcgtcgttaccgaagccgggttcgacgacctagccgatgctttggaa
tcggcccgcgacgaggcttccatcggcaagctcgatgaggcgcttcgccaggccgatcga
gacgaggccgcactgcgggccgagctggcggacccggaggtggttgctgccgagaacagc
accccgcccgacctggcggcgttggattcgaccgccgacgaggcccgccgagctgcggag
gaggcggtggcccggctgcgcgcagccgaggctgccgattcggaattggccgacctgctg
ggccgctggaccgtggccgaacgtgaactggcgccgatcgaggccgactacgcgaccctg
gacgcgttgaccgatgtggtcaacggacgcgggcagaacaaccgcaagatgtcgctgcgc
tcgtatgtgctggcggcccgcctcgaagaggtcgcggtcgccgcgacccgtcgactacag
cggatgagccaaggccgctattccttcgtgcactcggatgcggcaggtagtcggggtaag
cggggcggcctgtggctggacgtgatcgacgactactccggccgggctcggtccgccaag
acgctgtccggcggtgagtccttcctcgcgtcgttggcgctggccctgggactggccgac
gtggtcgcggcagagacgggcggcgcgttgctcgacaccctgttcgtcgacgaggggttc
ggcagcctcgacgccgacaccctggacctggtgatggataccctcgacgaacttcgtgcg
ggcggacgcgtcgtgggtctcgtctcgcacgtggaggaactgcggcaacgcatcccgaca
cggttgcgggtgcgccgctctcgaactgggtccaccctggagatggagatggcttaa
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