Actinoalloteichus hymeniacidonis: TL08_04825
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Entry
TL08_04825 CDS
T04472
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm03420
Nucleotide excision repair
ahm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TL08_04825
03430 Mismatch repair
TL08_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahm03400
]
TL08_04825
Enzymes [BR:
ahm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TL08_04825
DNA repair and recombination proteins [BR:
ahm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TL08_04825
MMR (mismatch excision repair)
Other MMR factors
TL08_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Replic_Relax
Motif
Other DBs
NCBI-ProteinID:
AOS61795
UniProt:
A0AAC9HM73
LinkDB
All DBs
Position
1003298..1006621
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AA seq
1107 aa
AA seq
DB search
MSGAPTGSRIAVSPAEIADALDLPTPTEEQVAVIASPSEPALVIAGAGAGKTETMAARVV
WLVANGLVAPERILGLTFTRKAARQLADRVRARLRRLVGSGLLDRLDPGGGRTSAVLAGE
PTILTYHAYAGRLVSEHGLRLPAEPGARLLSETAAWQLAHRVVSTWTEDIDTDKIPSTIT
GYLLGLAGELAEHLVTPERLSAHAAEFCRVVEDAPRVARQRAALPQDLRDKLAVQRLRVA
LLPLLADYAARKRREGVMDFADQMSSAARLADEHPEVAEIEQSRFGAVLLDEYQDTGHAQ
RVLLRALFGGGNRLPVTAVGDPAQAIYGWRGASAANLPRFRTDFPRIDAHGELAPARGYG
LLTSFRNPPEVLTLANAVSAPLRQAGLEVEELRSKPGAETGDVRCALLPDVRVERAWLAK
AMATRWRQVVADTGSPPTAAVLVRRRADMAELADALRAEGLPVEVVGLGGLLDEPEVRDL
VSALRMLVDPLAGTAAARLLTGARWRLGVADLAALWTRAGQLADGGSRQEHTGSPVDALP
GEHAEQAGLIDALEDPGPPEAYSAVGFRRIQRLARELAMLRRRLDQPLPELVADVERTLL
LTVESLARPGAIGRAHLDAFADVVAEFAAASPIAGVSALLDYLKVAERAEDGLEPGEVEV
AEDRVQVLTMHAAKGLEWEIVAVPHVVQKVFPGGRRSADWLGSVVQLPAELRGDAVDLPQ
LRIPPGADRKVVIETLTEHSEDFEQRRLLEERRLCYVALTRSERTLLVSGHWWGETGKSP
RGPSDFLTEIREVLSARTGVGVVDHWAAPPEPDAENPLAATINSAEWPKDPLGRRRADVL
AGAERVRAALAELSSTPGDQQPEPTGDAVAETGSAAEDDPEGWQRDVSVLLAERASAHSG
GDEVLLPAHLSVSRLVELAADPEALARKLRRPLPHPPSQSARRGTAFHAWLERRFAVTSL
LDMDDLPGAADDDVEEPITALSELQEAFLAGSWADRTPYAVEVSFETEVDGVALRGRMDA
VFADKDGGWTVVDWKTGAPPSPDRLPALAVQLAAYRLAWASLSRTPLVQVRAAFHYVRAN
RTVQPADLLDSEGIRAILRKIPDAGDP
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcgcccaccggcagcaggatcgccgtcagtccagccgagatcgccgacgcc
ctcgacctgcccaccccgaccgaggaacaggtcgcggtgatcgcgtcgccgtccgagccc
gccctggtcatcgcgggcgcgggcgcgggcaagaccgagacgatggcggccagggtggtc
tggctggtcgccaacggtctggtggcgccggaacggatcctcgggctgaccttcaccagg
aaggcggcccgacaactcgcggaccgggtccgggcccggctgcgccgattggtcggctcc
gggttgctcgatcgactcgaccccggcggcggccggacctcggccgtcctcgcgggcgag
ccgacgatcctgacctatcacgcctacgcgggccgattggtgtccgaacacgggctccgg
ttgcccgccgaacccggcgcccggctgctcagcgagacggcggcctggcagctcgcccat
cgggtcgtgtccacctggaccgaggacatcgacaccgacaagattcccagcaccatcacc
ggttacctgctgggtctcgcgggcgagctggccgagcacctggtcaccccggaacggctc
agcgcgcacgccgccgagttctgccgggtggtcgaggacgcgccgagggtcgcccgccaa
cgggctgcgctgccgcaggacctgcgggacaaactggcggtgcagcgacttcgcgtggcg
ttgctgccgctgttggccgattacgcggcccgcaagcgccgcgagggcgtgatggacttc
gccgatcagatgtcctcggccgcacgcttggccgacgagcatcccgaggtcgccgagatt
gagcaatcccggttcggcgccgtgttgctggacgagtatcaggacaccgggcatgcccag
cgggtgctgttgcgggcgttgttcggcggcgggaatcggctcccggtgacggcggtcggc
gacccggcccaggccatctacggctggcgcggggccagcgcggccaacctgccacggttt
cgcaccgacttcccgcgcatcgacgcccacggcgagctcgcacccgcgcgcggttatgga
ctgctcaccagtttccgtaatccgcccgaggtgctgacgctggccaacgcggtgtccgcg
ccgctgcgccaggcgggtctggaggtcgaggagcttcgatccaagccgggggccgagacc
ggcgatgtgcggtgcgcgttgctgcccgacgttcgtgtcgaacgagcctggttggccaag
gcgatggcgacccgctggcggcaggtggtggccgacaccggcagcccgcccaccgcggcc
gtcctggttcgtcgtcgggcggacatggccgaactcgcggacgcgctgcgggccgagggc
ctgccggtggaggtcgtcggactgggcggtctgctggacgaaccggaggtgcgtgacctg
gtcagcgcgctgcggatgctggtcgacccactggcgggcacggcggcggctcgactgctc
accggggctcgttggcgcctgggtgtcgccgacctcgcggccctgtggaccagggcggga
caactggccgacggtggttcgcggcaggagcacaccggttcgccggtcgacgcgttgccg
ggcgaacacgccgagcaggccgggctgatcgacgctctggaggaccccggaccgcccgag
gcgtactcggcggtgggattccgtcgcatccaacgactggccagggaactggccatgctg
cgccgccgtctcgatcaaccgctgcccgaactggtggccgacgtcgagcggacgttgttg
ctcaccgtggagagcctggccaggcccggcgcgatcggccgggcgcacctcgacgccttc
gccgacgtggtcgccgagttcgccgccgcgagtccgatcgcgggcgtctcggcgctgttg
gactacctgaaggtggccgagcgggccgaggacggcctggaacccggcgaggtggaggtg
gccgaggaccgggtgcaggtgttgaccatgcacgcggccaagggcctggaatgggagatc
gtcgccgttccgcacgtcgtgcagaaggtcttccccggcggcaggcgttcggcggactgg
ctcggctcggtggtccagttgcccgctgagttgcgcggtgacgcggtggacctcccgcag
ctgcgaatcccaccgggtgccgaccgcaaggtcgtcatcgagacgctgaccgagcattcc
gaggacttcgaacaacggcggctgctggaggagcgcaggctctgctacgtcgcgttgacc
cgatccgagcgcacgctgttggtctccgggcactggtggggcgagacgggcaagagccca
cgcggaccctcggacttcctgacggagatccgcgaggtgctcagcgctcggaccggggtc
ggcgtcgtcgatcactgggcggccccgccggagccggacgcggagaatccgttggccgcc
acgatcaactcggccgaatggccgaaggatccgttgggcaggcggcgagccgatgtgttg
gcgggcgccgagcgggtgcgtgcagccttggccgagttgtcctcgactccgggcgatcag
cagccggagccgacgggcgatgcggtcgccgagaccggatcagcagccgaggacgatccg
gagggctggcagcgggacgtctcggtgttgctcgcggagcgcgcctcggcccattcgggc
ggcgacgaggtactgctgcccgcccacctgtcggtcagcagactcgtggagttggccgcc
gatcccgaggcgctggccaggaagctgcggcggccgctgccgcatccgccgagtcagtcg
gcccgccgggggaccgccttccacgcctggctcgaacgacggttcgcggtcaccagtctg
ctcgacatggacgatctccccggtgccgccgacgatgacgtggaggagccgatcacggcg
ctctccgagctgcaggaggcctttctcgcgggctcctgggcggatcggacgccctacgcg
gtggaggtgtccttcgagaccgaggtcgacggggtggcgctgcggggccggatggatgcc
gtcttcgccgataaggacggcggctggaccgtggtggactggaagaccggggcaccgccg
tccccggaccggctacccgcgctcgctgtgcagttggcggcgtatcgactcgcctgggcg
tcgctgtcgcgcacgccgctggttcaggtccgcgccgccttccactacgtgcgggcgaat
cggaccgtgcaacccgccgacctgctcgattccgagggcatccgagcgattcttcgaaag
atccccgatgcgggtgacccctga
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