Actinoalloteichus hymeniacidonis: TL08_07255
Help
Entry
TL08_07255 CDS
T04472
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TL08_07255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahm03021
]
TL08_07255
03019 Messenger RNA biogenesis [BR:
ahm03019
]
TL08_07255
Transcription machinery [BR:
ahm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TL08_07255
Messenger RNA biogenesis [BR:
ahm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TL08_07255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AOS62269
UniProt:
A0AAC9HMW4
LinkDB
All DBs
Position
1543338..1545218
Genome browser
AA seq
626 aa
AA seq
DB search
MVLAELRQLAGELGISDTTGMRKGDLIAAIRERQGGSSRRGAAAQQQEAPAQLAVEIPEK
AAAPKTEAPQQPSKSEDAAAGSGGSGQASGDGEEEGGRRGRRRRSSSRSTGNSEQSDGRG
ERASGEERAERNGRDDRNAERGDRQERGEGRGRGEGRERGEGRDRGERGEGRDRGERGDR
QDRGDRQERGEPRDSRDNRNDDDDDEAGGGRRRGRRFRDRRRGRTRTDGGGSSGGGSGAG
EPEVREDDVLLPVAGILDVLENYAFVRTSGYLAGSNDVYVSLSLVRKYGLRRGDAITGAV
RQPRDNEQQRQKFNPMVRVDTINGLEPDAVRNRPEFTKMTPLYPNERLRLETEPHVLTTR
VIDLVMPVGKGQRALIVSPPKAGKTMVLQAIANAITTNNPECHLMVVLVDERPEEVTDMQ
RSVKGEVIAATFDRPPADQTTVAELAIERAKRLVELGFDVVVLLDSITRLGRAYNLAAPA
SGRILSGGVDSTALYPPKRFLGAARNIENGGSLTIFATALMETGSTGDTVIFEEFKGTGN
AELKLDRKLADKRTFPAVAVDASSTRKEELLLSPDELAVTHKLRRVLAALDDQQALDLVL
TQLRKTRTNIEFLMQVAKNTPGNGDQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttgccgagcttcgacagctcgcaggcgaactcgggatttccgacaccacggga
atgcgtaagggagatctgatcgctgccatccgtgagcgtcagggcggttcgtcccgccga
ggcgctgcggctcagcagcaggaggctccggcgcagctcgccgtggagatcccggagaag
gcggccgccccgaagaccgaggctccgcagcagccgagcaagagcgaggacgctgccgca
ggctccggcggttctggacaggccagcggtgatggcgaggaggagggcggccgtcgcggg
cgccgtcgtcgttcctccagccgctcaacgggcaactccgagcagtccgacggccgcggt
gagcgcgcctcgggcgaggagcgtgccgagcgcaacggccgcgatgaccgcaacgccgag
cgcggcgaccgtcaggagcgcggcgagggccgcggccgtggcgagggccgggagcgcggc
gaaggtcgtgaccgtggcgagcgtggcgagggccgtgaccgaggtgagcgcggcgaccgt
caggaccgcggcgatcgtcaggaacggggcgagcccagggattcgcgggacaaccgcaac
gacgacgacgatgacgaggcaggcggcggcaggcgccggggcaggcgtttccgggaccgc
aggcgcggccggacccgcaccgacggcggcggaagcagcggcggcggcagcggcgcaggc
gagccggaggttcgcgaggacgacgtgctgctcccggttgcgggcatcctggacgtgctg
gagaactacgcgttcgtccgcacctcgggttacctcgccggttccaacgacgtctacgtg
tcgctctcgttggttcgcaagtacggcctgcgccgtggtgacgccatcaccggcgccgtc
cggcagccgagggacaacgagcagcagcggcagaagttcaacccgatggtccgggtggac
acgatcaacggcctggaacccgacgcggttcgcaaccggcccgagttcaccaagatgacc
ccgctgtacccgaatgagcggctgcgtctcgaaaccgagccgcacgtcctgactactcgg
gtcatcgacctggtgatgccggtcggcaaggggcagcgcgccttgatcgtctcgccgccg
aaggccggtaagacgatggtcctgcaggccatcgccaacgccatcaccacgaacaacccc
gagtgccacctgatggtcgtgcttgtcgacgagcgacctgaagaggtcaccgacatgcag
cgttccgtcaagggcgaggtcatcgcggcgaccttcgaccggccgcctgcggaccagacc
acggtcgccgagctggccatagagcgcgccaagcgactggtggagctgggcttcgacgtc
gtcgtgctgctcgactcgatcacccgcctcggccgggcctacaacctggcggcgcccgcc
tctggtcggatcctctccggtggtgtggactccacggcgctgtacccgccgaagcggttc
ctcggagcggcgcgcaacatcgagaacggtggctcgctgaccatcttcgccaccgcgctc
atggagacgggctcgaccggcgacacggtgatcttcgaggagttcaagggcaccggcaac
gccgagctcaagctcgaccgcaagctcgccgacaagcggaccttccccgccgtggccgtg
gacgcgtcgagcacccgtaaggaagagctgctgctctcgccggacgagctggccgtgacg
cacaagctgcgtcgcgttctggccgcactggacgaccagcaggcactcgacctggtgctc
acgcagctgcgcaagacgcgcaccaacatcgagttcctgatgcaggtggcgaagaacacg
ccgggcaacggcgatcagtga
DBGET
integrated database retrieval system
