KEGG   Actinoalloteichus hymeniacidonis: TL08_11075
Entry
TL08_11075        CDS       T04472                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
  KO
K03090  RNA polymerase sigma-B factor
Organism
ahm  Actinoalloteichus hymeniacidonis
Brite
KEGG Orthology (KO) [BR:ahm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahm03021]
    TL08_11075
Transcription machinery [BR:ahm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TL08_11075
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_Crp_2 HTH_3 HTH_24 HTH_23 MarR DUF7343 PF0610-like_N GerE MarR_2 HTH_ParB Sigma70_ECF HTH_Tnp_4 HTH_31 NirdL-like_HTH DUF134
Other DBs
NCBI-ProteinID: AOS63029
UniProt: A0AAC9MY42
LinkDB
Position
2400112..2400894
AA seq 260 aa
MTQRSPVSSRDQTYEHLLPLFVTLTEISEGDPRRSSVRERLITEHQALALHIAQRFSNRG
VAMDDLVQVANVGLIQAVDRFDPARGTDFLAFAVPTIMGEVRRYFRDRSWSVHLPRRLKE
LHLAINAVVRELSQVLGRAPTSNEIAAKLGISREEVIEGLEVRHAYRSSSLDEVLGDEDS
PALSSTLGAEDPEMVVVENREALHPLLAALPERERTVLLLRFFGNMTQTQISERVGVSQM
HVSRILTKTLRHLREQLADS
NT seq 783 nt   +upstreamnt  +downstreamnt
gtgactcagcgctcgccggtgagcagccgggatcagacctacgaacacctgcttccgctg
ttcgtgaccctgaccgagatctcggagggcgatccccggcggagttcggtgcgcgagcgc
ctcatcaccgagcatcaggcgttggcgctgcacatcgcgcaacggttcagtaatcggggc
gtggcgatggacgatctcgtacaggtcgccaatgtcggtctcatccaggccgtcgaccgg
ttcgatcccgcgcggggcaccgacttcctggccttcgcggtaccgaccatcatgggcgag
gtacgccgctacttccgggaccgcagctggtcggtgcacctcccacgaaggctgaaggaa
ctgcacctcgcgatcaatgcggtggtccgcgagctgtcccaggtgctcggtcgggcaccg
acctcgaatgagatcgccgccaagctgggcatctcccgcgaagaggtcatcgagggtctc
gaggtccgccatgcctaccggtcgtcctccctggacgaggtgctgggtgacgaggactcc
ccggcgctgagcagcacgctgggcgcggaggacccggagatggtggtggtggagaaccgc
gaggcactgcacccgttgttggccgcgctgcccgaacgcgagcgcaccgtgctgttgctg
cggttcttcggcaacatgacacagacccagatcagcgaacgggtcggtgtctcgcagatg
cacgtctcccgcatcctgaccaagacgctgcggcacctgcgagagcagctcgccgacagc
tga

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