Actinoalloteichus hymeniacidonis: TL08_18855
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Entry
TL08_18855 CDS
T04472
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm00040
Pentose and glucuronate interconversions
ahm01100
Metabolic pathways
ahm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TL08_18855
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TL08_18855
Enzymes [BR:
ahm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TL08_18855
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AOS64562
UniProt:
A0AAC9N002
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All DBs
Position
complement(4472986..4474023)
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AA seq
345 aa
AA seq
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MTRFGILRNPGRRRRSVVLIALLATVGGVVSVAPATADAPPAGQVYSDVADGFAGTSGLG
VERTTGGEGGETVTVTDYESLVRYATAPEPYVIRVGGEITVTPYGTEIRVASDKTIVGVG
LVGHIVNGGFFLGDGVHNVIIRNLTIRDTLMEEDDPDDKDFDYDGIQLDNAHHVWIDHNT
ITRMNDGLIDSRKDTTYLTVSWNVLAENNKSFGIGWTDNVTSRITIHHNWIRDTNQRNPS
ADNIAYAHLYNNYLQNVRSTGNHSRGATKMVLENSYFDNVKDPYYLDAAAELRESGNIVV
NSTGKRDSGGSAFNPSDFYSYTLDSAADIPALLGTEAGPQADIGQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggttcggaattcttcggaacccggggcggcgacggcgatccgtcgtgctgatc
gccctactggccacggtcggcggggtggtgtccgtggcgcccgccaccgccgacgcacca
ccggccggacaggtctactccgatgtcgccgacggattcgcgggcaccagcggactgggt
gtcgagcgcaccaccggcggcgagggcggcgagaccgtcaccgtcaccgactatgaatcc
ctggtccgctacgccacggcccccgagccctacgtcatccgggtcggcggcgagatcacc
gtcacgccctacggcaccgagatccgggtggcctccgacaagaccatcgtgggcgtcggc
ctggtgggacacatcgtcaacggcggtttcttcctcggcgacggcgtccacaacgtgatc
atccgcaacctcaccatccgcgacacactgatggaggaggacgaccccgacgacaaggac
ttcgactacgacggcatccaactcgacaacgcgcaccatgtctggatcgaccacaacacc
atcactcggatgaacgacggactgatcgacagccgcaaggacaccacctacctgacggtg
tcgtggaacgtgctcgccgagaacaacaagtccttcggtatcggctggaccgacaacgtc
acctcgcggatcaccatccaccacaactggatccgcgacaccaatcagcgcaaccccagc
gccgacaacatcgcctacgcgcatctctacaacaactacctgcagaacgtgcgatccacc
ggaaaccattcgcgtggcgccaccaagatggtcctggagaacagctacttcgacaacgtc
aaggacccgtactacctggacgcggccgcggaattgcgcgagtccggcaacatcgtggtc
aactccaccggaaagcgggattccggcggctcggcgttcaacccgagcgacttctattcc
tacaccttggactcggcggccgacatccccgcattgctgggcaccgaggccggaccacag
gccgacatcgggcagtga
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