Actinoalloteichus hymeniacidonis: TL08_19610
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Entry
TL08_19610 CDS
T04472
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm03030
DNA replication
ahm03430
Mismatch repair
ahm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TL08_19610
03430 Mismatch repair
TL08_19610
03440 Homologous recombination
TL08_19610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahm03032
]
TL08_19610
03400 DNA repair and recombination proteins [BR:
ahm03400
]
TL08_19610
Enzymes [BR:
ahm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TL08_19610
DNA replication proteins [BR:
ahm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TL08_19610
DNA repair and recombination proteins [BR:
ahm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TL08_19610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AOS64713
UniProt:
A0AAC9HSL6
LinkDB
All DBs
Position
4647758..4651324
Genome browser
AA seq
1188 aa
AA seq
DB search
MSDSFVHLHVHTEYSMLDGAAKVAPLFAEAERLGMPAVGMTDHGNMYGSAEFYRQAKKRD
IKPIIGIEAYIAPVSRFHKKPVFWGESNQRSSDQSGEGGDVSGAGAYTHMTMLAGNATGL
RNLFKLSSLASYEGYYRKPRMDRELISEHAEGIIATTGCPSGEVQTRLRLGQPREAMQAA
SDYRDIFGAENFFLELMDHGLPIERSVREGLLHIGRELGLKPLATNDSHYVTQDQADTHG
ALLCVQSGKTLTDPTRFKFDGDGYYLKSADEMRAYWDTEVPGATDSTLLIAERVESYDEV
YAHVDRMPRFPLAEGETENSVLRAEVEQFTPARFPNGLTQEYQDRIERELGVIAQMGFPA
YFLVVGDLVRWAKDQKIAVGPGRGSATGSLVAYILRITDLDPIEHSLLFERFLNPERISM
PDIDLDFDERRRGEVMDYTVEKWGAENVAQVITYGTIKTKAAIKDAARVHYGQPGFSIAD
RISKALPPPVAAKDIPLAGIVDPSHERYAEASEIRSLIQSDQEVSTIFETARGLEGLTRN
AGVHACAVILSSQPLLDVIPLWKRDDGSIITGWDYPACEDIGLLKMDFLGLRTLTVIDDT
IKEVERNHGIQIDLETLGLDDKASYELLSRGDTLGVFQLDGAAMRDLLRRMQPKHFGDIA
AVIALYRPGPMAANAHINYAERSNGRQKITPIHPELKDALEPILGETYHLLVYQEQVMAI
AQQLAGYTLGGADLLRRAMGKKKKEVLEQEFEKFNKGMLGNGYSEESIQTLWDVMLPFAG
YAFNKSHTAGYGLVAYWTAFLKANYPTEFMAAQLTSIGGDKDKSAVYLAECRRLGIKVLA
PDVNDSGLHFAAVGKDIRFGLGAVRNVGANVVQSIVSRRKEKGRYTSFTDFLDKAEIVAC
NKRVIESLVKAGAFDSFDTSRRSLFEHHEAAVDAVIGLKRQEALGQFDLFGGGDEDGGAS
AEASPLAHLNFSSDEWPRKQLLAYEREMLGLYVSAHPLDGAERILRKHAPKAIATIVNEA
PKEGEVVVAGMISSVDRRVNKQGEPWAIVTIEDLDSAIEVLFFHKSYSVLHEDLIPDSSV
AVKGRVNWREDKMSIFGSGVVQLDISAAETNPGVAPAVMLRAEAHRLTRDVVGELRSTLL
AHRGDAPLRLVLVHNDAEETYEVEKYPVEFSGAFAAELKAIPGLTVVS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgactcgttcgtccatctacacgtccacaccgagtactcgatgctggacggagcc
gccaaggtagcgccgctgttcgccgaggccgagcggctgggtatgcccgccgtcggtatg
accgaccacggcaacatgtacggatcggccgagttttaccggcaggcgaagaagcgggac
atcaagccgatcatcggtatcgaggcctacatcgccccggtgagccgctttcacaaaaag
ccggtgttctggggtgagagcaaccagcgctccagcgaccaatccggtgagggcggcgac
gtctccggcgcgggcgcctacacacacatgacgatgctcgcgggcaacgccaccgggctg
cgcaacctgttcaagctttcgagtctggcttcttacgagggctactaccgcaagccccga
atggaccgggaactcatctcagagcacgccgaggggatcatcgccaccaccggctgtccc
tccggcgaggtgcagacccggctgcggctgggccagccgcgcgaggcgatgcaggcggcg
tcggactatcgggacatcttcggcgccgagaacttctttctggagttgatggaccacggg
ctgcccatcgagcgatcggtgcgcgagggcctgttgcacatcggtcgcgaactcggactg
aagccgttggcaaccaacgactcgcactatgtcacgcaagatcaagccgatacccacggc
gcgttgctctgcgtccagtcgggtaaaaccctcaccgacccgacccgcttcaagttcgac
ggcgacggctactacctgaagtccgccgatgagatgcgggcctactgggacaccgaggta
cccggcgccacggatagcacgctgctcatcgccgagcgtgtcgagtcctacgacgaggtc
tacgcccatgtcgaccgaatgccccggttcccgctcgctgagggagagacggagaacagc
gttctacgggccgaggtcgaacagttcacgccagcccgctttccgaacggattgacccag
gagtaccaggaccgcatcgagcgggaactcggcgtcatcgcccagatgggattcccggcc
tacttcctggtggtcggcgaccttgtccggtgggccaaggaccagaagatcgccgtgggt
ccgggccggggttctgccaccggatcgctcgtggcctacatcctgcggatcaccgacctc
gacccgatcgagcactctctactgttcgaacggttcctgaaccccgagcgcatctcgatg
cccgacatcgacctcgacttcgacgagcgcaggcgcggcgaggtcatggactacacggtc
gagaaatggggcgcggagaacgtcgcacaggtcatcacctacggcaccatcaagaccaag
gccgccatcaaggatgccgcccgcgtccactacggccagcccggattcagcatcgccgac
cggatctccaaggcgctccccccgccggtagcagccaaggacatcccgctggcaggcatt
gtcgaccccagtcacgagcgatatgcggaagccagtgagatccgttctctgatccagagc
gatcaggaggtctcgaccattttcgagaccgcccgaggtttggagggtctcacccgtaac
gcgggcgtgcacgcctgtgcggtgatcctctcctcgcagccgctgctcgacgtcatcccg
ctgtggaagcgcgatgacgggtcgatcatcaccggctgggattacccggcttgcgaggac
atcggcctgttgaagatggacttcctcgggctgcgcaccctgacggtcatcgacgacacg
atcaaggaagtcgaacgcaaccacgggatccagatcgacctcgagaccctgggactcgac
gacaaggcgtcctatgagctgctgagtcggggcgacaccctgggcgtgttccagctcgac
ggtgccgcgatgcgggacctgctgcgccgtatgcaacccaaacacttcggtgacattgcc
gctgtgatcgccctgtaccgacccggtccgatggccgcgaacgcgcacatcaactacgcc
gagcgctcgaacggcaggcagaagatcacgcccatccacccggagctgaaggacgctctg
gagccgattctgggtgagacctaccacctgttggtctaccaagagcaggtcatggccatc
gcccagcagctcgccggatacaccctgggtggcgcggacctgctgcgacgggccatgggt
aagaagaagaaagaggtcttggagcaggagttcgagaagttcaacaaggggatgctcggc
aacggctactcggaggagtcgatccagacgctctgggacgtcatgttgcccttcgcgggc
tatgcgttcaacaagtcccataccgccggttacgggctcgtggcgtactggaccgctttc
ctcaaagccaactacccgactgagttcatggcagctcaactcacgtccatcggcggcgac
aaggacaagtccgccgtgtacctggcggagtgcaggcgcttgggcatcaaggtcctcgca
ccggatgtgaacgactccgggttgcacttcgccgccgtcggcaaggacatccgcttcggc
ttgggcgcggtacggaacgtgggcgccaacgtcgtgcaatcgatcgtctctcgccgcaag
gaaaagggccgatacacctcgttcaccgatttcctggataaggccgagatcgtggcctgt
aacaagcgggttatcgaatcactggtcaaggcaggtgccttcgactccttcgatacctcg
cgtcgctcccttttcgaacatcacgaggcggcggtcgatgccgtgatcgggctcaagcgc
caggaggcgctcggccagttcgacctgttcggtggcggagacgaggacggcggtgcgtcc
gccgaggcctcgccgttggcccacctcaacttctcctcggacgaatggccgcgtaagcag
ctactcgcctacgaacgggagatgttgggcctctacgtgtcggcgcatcccttggacggt
gcggaacgcatcctgcgcaagcacgcgccgaaggcgatcgcgaccattgtgaacgaggcg
ccgaaggagggtgaggtcgtcgtcgccgggatgatctccagcgtcgatcgccgggtgaac
aagcagggcgagccgtgggcgatcgtcaccatcgaggacctggattccgcaatcgaggtg
ctgttcttccacaagagttacagcgtcctgcacgaggatctgatccccgactcctcggtc
gcggtcaagggccgggtgaactggcgcgaggacaagatgtcgatcttcggctcgggtgtg
gtccagctcgacatcagcgcggccgagaccaatcccggggtggcacctgccgtgatgttg
cgggccgaggcccaccgactgacccgcgacgtcgtcggcgaactgcgcagcaccctgctg
gcccaccggggcgatgccccgttgcggttggtcctggtgcacaacgacgccgaggagacc
tacgaggtcgagaagtacccggtcgagttcagcggcgccttcgccgccgagctgaaggcg
atccccggtctgacggtggtgtcgtga
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