Actinoalloteichus hymeniacidonis: TL08_21735
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Entry
TL08_21735 CDS
T04472
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm03030
DNA replication
ahm03430
Mismatch repair
ahm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TL08_21735
03430 Mismatch repair
TL08_21735
03440 Homologous recombination
TL08_21735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahm03032
]
TL08_21735
03400 DNA repair and recombination proteins [BR:
ahm03400
]
TL08_21735
Enzymes [BR:
ahm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TL08_21735
DNA replication proteins [BR:
ahm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TL08_21735
DNA repair and recombination proteins [BR:
ahm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TL08_21735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AOS65134
UniProt:
A0AAC9HT54
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All DBs
Position
5116089..5117846
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AA seq
585 aa
AA seq
DB search
MSCPTIRLACQPMTDVAGLPDRQLTFDELGTPLRDVTFVVVDLETTGGSNRGDAITEIGA
VKVRGGQVIGEFGTLVNPGRGIPPMIMSLTGITDAMVTEAPRIDSVLPAFLEFAAGCVLV
AHNAPFDVGFLRSAAEALERPWPRPTVLCTVRLARRILSRDEAPNVKLGTLARLFRSDTT
PSHRALADARATVNVLHGLLERVGGVGVQSLEELLDYLPEVTSAQRRKRELAADLPHAPG
VYLFRGPREEVLYVGTAVDLRRRVRQYFTASESRARVREMVAIAERVDVVECAHSLEAEV
RELRLLAAHRPRYNRRSTTPHRAWWIVLTDEAFPRLSVVRKPRDEAMGPFRSKRAAEEAV
ESLHDGSEVRRCVERIPARDPKGRPCTLAEIGRCAAPCAGRQSVAEYAPAVIDVADLFAG
TRTTVLDRLGDQLAELSERQRFEDAARRRDRLATLVRALDRGQRLAALAAVGELVAARPD
GAGGWHLAVIRHGRLASAGTARRGVPPMPVVEMLRASAETVLCEPGPLRGATADEITVIR
RWLTTGGTRLVDSDVLWAEPAGGAGSWQRWVAKADAGRAGYAAAD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgtccgaccatccgattagcctgccagccgatgaccgacgtggcaggactcccg
gatcggcagctgacgttcgacgaactcggaacgccgctgcgcgacgtcaccttcgtcgtc
gtcgacctggagaccaccggcggcagcaaccggggtgacgccatcaccgagatcggtgcg
gtcaaggtgcgcggcggccaggtgatcggcgagttcggcacgctggtcaaccccggtcga
ggcatcccgccgatgatcatgtcgctcaccgggatcaccgatgcgatggtcaccgaggcg
ccccggatcgactcggtcctgcccgccttcctggagttcgccgccggttgtgtgctggtg
gcgcacaacgcgcccttcgacgtcggattcctgcgctccgccgccgaggccctcgaacgc
ccctggccccggccgacggtgctctgcaccgtccggctggcccgccggatcctcagccga
gacgaggccccgaacgtcaaactcggcaccctcgcgcggctcttccgctccgacacgacc
cccagtcaccgggcgctcgccgatgcacgggccacggtgaacgtcctgcatggactgctc
gaacgagtcggcggcgtcggcgtccagtccctggaggagctgctggactacctgcccgag
gtgacctcggcgcaacgccgaaagcgggagctggccgccgatctgccgcatgcccccggc
gtgtacctgttccggggaccccgcgaggaggtgctctacgtgggcaccgccgtcgatctg
cgccgccgggtgcggcagtacttcaccgcgagcgagagtcgcgcccgggtccgggagatg
gtcgcgatcgccgaacgggtcgacgtcgtggagtgcgcgcactccctggaggccgaggtt
cgcgaactgcgcttgctggccgcccaccgcccccggtacaaccgccggtccaccacgcca
catcgcgcctggtggatcgtgctgaccgacgaggccttcccccgcctgtcggtggtacgc
aaaccccgagacgaggcgatgggccccttccgatccaaacgggccgccgaggaagcggtg
gagagcctgcacgacggcagcgaggtacgtcgttgcgtggaacgcattcccgcccgggac
cccaagggcaggccgtgcacgctcgccgagatcggccggtgcgcggcgccgtgtgcaggc
aggcagagcgtcgcggagtacgcgcccgcggtgatcgacgtggccgacctgttcgcgggt
acccgcaccacggtgttggaccgcctcggggatcagctcgccgagttgtccgagcggcag
aggttcgaggatgcggcccgcaggcgcgaccggctggccaccctcgttcgggcgttggac
cgaggccagcggctcgcggcgctggcggccgtcggcgaactcgtcgcggcccgaccggac
ggtgcgggcggctggcacctggcggtgatccggcacggccggttggcctcggcgggcacc
gcccgacgcggggtgccgccgatgccggtggtggagatgctccgggcgagcgcggagacc
gtgctctgcgaaccggggccgctgcgcggggcgaccgcggacgagatcaccgtgatccgt
cgctggctcaccaccggcggcacccgactggtcgactccgacgtgctctgggccgaaccc
gcgggcggcgcgggcagctggcaacgctgggtcgccaaggccgacgcgggccgggcgggc
tacgcggcggcggactga
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