Actinoalloteichus hymeniacidonis: TL08_22380
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Entry
TL08_22380 CDS
T04472
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TL08_22380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahm03400
]
TL08_22380
Enzymes [BR:
ahm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TL08_22380
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TL08_22380
DNA repair and recombination proteins [BR:
ahm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TL08_22380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7560
Zn_ribbon_3
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AOS65258
UniProt:
A0AAC9HTP5
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All DBs
Position
complement(5265907..5266884)
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AA seq
325 aa
AA seq
DB search
MPELPEVEVVRRGLLDHAIGRTISEVEVLHPRAVRRHEPGPQDFADRLRGATLTAARRRG
KYLWLELTTTSTVGSELVGAASSTASQPPDSGAVASADATEEAVADSAALLVHLGMSGQL
LVKETGSPDEKHLRVRFRFDDAAGELRFVDQRTFGGLTLTDLVIVDGVALPTPVAHIGRD
PLDPKFDAKAVIKAMGRRRTGVKRALLDQSLLSGVGNIYADEALWRARLHWAAPTATLPP
AKAAELLDAATDVMREALKEGGTSFDALYVNVNGQSGYFDRSLAVYGQEGLPCPRCGSPV
RRDAFMNRSAFSCPGCQPEPVDAHH
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagcttcccgaggtcgaggtcgtccgtcgcggtctactcgatcacgctatcggt
cgaacgatctccgaggtggaggtcctgcatccccgggcggtgcgtaggcacgaaccgggg
ccgcaggacttcgcggatcggttgcgcggcgccaccctgaccgccgcccgccgccgaggg
aagtacctctggctggaactgacgaccacgtcgacggtgggctcggagctggtcggtgcc
gcctcgtcgacggcgtcgcagccgccggactcgggtgccgtggcctcggcggacgccacc
gaggaggcggtcgccgacagcgccgcgctactcgtgcacctcgggatgagcggccaactg
ctggtcaaggagaccggttccccggacgagaagcacctgcgggtccgcttccgcttcgac
gacgccgccggagaattgcggttcgtcgatcaacgcaccttcggcggcctgaccctgacc
gacctggtgatcgtcgacggcgttgcgctgccgacaccggtcgcgcacatcggcagggac
ccgctggatccgaagttcgacgccaaggccgtcatcaaggcgatgggcaggcggcgcacg
ggcgtcaaacgggcgttactcgatcaatccctgctctccggcgtcggcaacatctacgcg
gacgaggccctgtggcgggcccggctgcactgggcggccccgacggccaccctgcccccg
gcgaaggcggccgaactgctggacgcggcgaccgacgtgatgcgggaggctctgaaagag
ggcggcacctccttcgacgccctgtatgtgaacgtcaacgggcagtccgggtacttcgat
cgctcgctggcggtgtatggccaagagggcctgccctgcccgaggtgtggcagcccggtg
cggcgcgacgccttcatgaaccgttctgcattctcctgtcccggctgccagccggaaccc
gtcgacgcgcatcactga
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