Actinoalloteichus hymeniacidonis: TL08_23515
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Entry
TL08_23515 CDS
T04472
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ahm
Actinoalloteichus hymeniacidonis
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahm03016
]
TL08_23515
Enzymes [BR:
ahm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
TL08_23515
Transfer RNA biogenesis [BR:
ahm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
TL08_23515
Prokaryotic type
tRNA splicing ligases
TL08_23515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AOS65483
UniProt:
A0AAC9HU47
LinkDB
All DBs
Position
complement(5521191..5522381)
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AA seq
396 aa
AA seq
DB search
MHTEILGERVPIRVWADPAQIEDQALQQLRNVANLPWLHGLAVMPDVHFGKGATVGSVIA
MRDAVSPAAVGVDIGCGMSAVRTSLFDRDLPDDLAVLRSRIEAAVPVGFGLHKNPVDPAR
VPGTGGWDRFWSGFDQLHEGVQDRRSRAAKQIGTLGGGNHFIEVCLEQGGLDAGRVWLML
HSGSRNIGKELAERHVRIAQSLSHNKNLVDRDLAVFLTGTSEMDAYRRDLYWAQEYALRN
RATMMALVKKALSDTVPGTRFDPEISCHHNYVAEERYDGVDVLVTRKGAIRAGSGDLGII
PGSMGTGSYIVRGLGNDASFQSASHGAGRRMSRNKAKQLYTAADLAAQTQGVECRKDRGV
VDEIPAAYKDINEVIKAQQDLVKVVAHLKQVVCVKG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgagattctcggcgagcgcgtacccatccgggtctgggcggatcctgcccag
atcgaagatcaagcccttcagcagctgcgcaatgtcgccaatctgccctggttgcacggc
ctggccgtgatgccggatgtgcacttcggcaagggcgccaccgtgggaagcgtcatcgcg
atgcgcgacgccgtctcacctgcggcggtcggcgtcgacatcggttgcggcatgtccgcc
gtccggacctcgctgttcgaccgcgaccttcccgatgacctggccgtactgcggtcccgg
atcgaggcagccgtcccggtggggttcgggctgcacaagaacccggtggacccggccagg
gtgcccggtaccggcggctgggatcgcttctggtccggtttcgaccagctacacgagggc
gtgcaggatcggcggagccgggcggcgaagcagatcggcaccctcggcggcggaaaccac
ttcatcgaggtctgcctggagcagggcggcctcgacgccggacgggtgtggctgatgctg
cattccggctcccgcaacatcggcaaggaactggccgagcggcacgtgcggatcgcacag
tccctctcgcacaacaagaaccttgtcgaccgcgacctggcggtgttcttgacgggcacc
tcggagatggacgcctaccggcgggatctctactgggcgcaggagtacgcgctgcgtaac
cgggccacgatgatggcgctggtcaagaaggcgttgtcggacacggtgccgggtacccgc
ttcgatccggagatctcctgtcaccacaactacgtggccgaggagcggtacgacggcgtc
gacgtcctggtgaccaggaagggcgcgatccgcgccggctccggcgacctggggatcatc
ccgggcagcatgggaaccggttcctacatcgtgcgtggtctgggcaacgacgcgtcgttc
cagtcggcttcgcacggcgcggggcggcggatgtcgcggaacaaggccaagcagctctac
acggcggccgacctcgcggcgcagacccagggtgtggagtgccggaaggaccggggcgtg
gtcgacgagatccctgcggcgtacaaggacatcaacgaggtcatcaaggcgcagcaggat
ctggtgaaggtggtcgctcacctgaagcaggtggtctgcgtcaagggctga
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