Atlantibacter hermannii: NCTC12129_00097
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Entry
NCTC12129_00097 CDS
T05790
Symbol
selB
Name
(GenBank) selenocysteinyl-tRNA-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ahn03012
]
NCTC12129_00097 (selB)
Translation factors [BR:
ahn03012
]
Eukaryotic type
Elongation factors
NCTC12129_00097 (selB)
Prokaryotic type
NCTC12129_00097 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
GTP_EFTU
WHD_2nd_SelB_bact
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
SRPRB
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
VDZ71050
LinkDB
All DBs
Position
1:87561..89408
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AA seq
615 aa
AA seq
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MIIATAGHVDHGKTTLLQALTGINADRLPEEKKRGMTIDLGYAYWPQDDGRVIGFIDVPG
HEKFLANMLAGVGGIDHALLVVACDDGIMAQTEEHLTLLQLAGRPTLTVVLTKADRVDDA
RIGTVKNDVEALLARMSWTPEAIFVTAATQSHGIDALRQHIRELQPQAHPVAQRFRLAID
RAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVNKPMRVRGLHAQNTGTQQAHAGQRIALN
ISGDAQKEQLNRGDWLLSAAPRHICDRVIIDVHALVPLQQWQPLHIHHAASHITGRISLL
NERFAELVLDTPLWLCDNDRLILRDIGARHTLGGGRIVLTTPPRRGKRQSEFLDWLARLA
DAQDDAQALTLHLERGAVSLPDFAWHRQLTPSGLTALLNRPERLQAGEHLLSAEVAARWQ
RKLLDTLSYYHEQHSDEPGPGRERLRRMALPSQEEPLVLALIEKMREAGLIVSYQGWLHL
PAHQAGFTAEQQQRWEAISGLFGDDPWWVRDLARETGSDEQEMRKFLRQAALQGLITSIV
KDRYYRNDRIVMFADLIRRLDSEKGSTQAADFRDSLNVGRKLAIQILEYFDRIGFTRRRG
NEHLLRDAALFGRED
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgccaccgcaggacacgttgaccacggtaagaccacgttattgcaggcgctg
accggcattaacgccgatcgcctgccggaagagaaaaaacgcggtatgaccatcgatctg
ggctacgcctactggccgcaggatgacgggcgcgtgatcggatttattgatgtgccgggc
cacgagaaatttctcgcgaatatgctggcgggtgtgggcggtatcgatcacgccttgctg
gtggtggcgtgtgatgacggcatcatggcgcaaaccgaagaacatttaaccctgttgcag
ctcgccgggcggccaacgctgaccgtcgtgctcaccaaagcggaccgggtcgacgacgcg
cgtatcgggacagtgaaaaatgatgttgaggccctgctggcgcgcatgtcatggacgcct
gaggcgatcttcgtcactgcggccacccagtcccacggtattgacgctttacgccagcac
atccgcgaactgcaaccgcaagcgcatcctgttgcgcaacgttttcgtctggcgattgac
cgggcatttacggtaaaaggcgcgggcctggtggtgacgggaaccgcgctcagcggtgaa
gtgaatgtcggtgatacgctgtggctgacgggcgtgaataagccgatgcgggtacgtggc
ctgcatgcgcaaaacaccgggacccaacaggcacacgctggtcagcgtattgcgctgaat
atcagcggcgatgcgcaaaaagagcagctcaaccgcggcgactggctgctttctgccgcg
ccgcgtcatatctgcgaccgtgtgattattgatgtgcatgcgctggtgccgctccagcaa
tggcaaccgctgcatatccatcatgccgcaagccatattaccgggcgtatttctttactc
aacgaacgtttcgccgaactggtgttagatacgccgctctggctttgcgataacgaccgg
ctgatcctgcgcgatattggggcgcggcatacgctgggcggcggtcgcattgtgctgacg
acgccgccgcgtcgtggcaagcgtcagagcgaatttttagactggctggcacgccttgcc
gatgcgcaggatgatgcgcaggcgctgacgctacacctggagcgcggcgcggtatcactg
ccagatttcgcctggcatcgccagcttacgccgtcgggactgacggcgttgttgaaccgg
ccggagcgtttacaggcgggtgagcacttactgagcgccgaagtggcggcgcggtggcag
cgcaagctgttagacactctgagctactatcacgaacagcacagcgatgaacccggcccc
gggcgtgaacgtctgcgtcgcatggcgttgccgtcgcaggaagagccgctggtgttagcg
ttgatagaaaaaatgcgcgaagcagggctgattgtgagctatcagggctggctgcatttg
ccggcgcatcaggccggatttaccgcagaacagcaacagcgctgggaggcgatttctggt
ttgtttggcgatgacccgtggtgggtacgcgatttagcgcgcgaaacgggcagcgatgaa
caggaaatgcgtaaattcctccgccaggcggcgttacaggggctgattacgtcgatcgtc
aaagatcgttattaccgtaacgatcggattgtgatgtttgctgatttgatccgccgactg
gacagtgaaaaaggatcaacccaggcggcggatttccgcgacagccttaatgtgggccgt
aaactcgccattcaaatccttgagtattttgatcgcatcggctttacacgtcgccgcggt
aacgagcatctgttacgcgacgccgcattatttggccgcgaggattaa
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