Atlantibacter hermannii: NCTC12129_00319
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Entry
NCTC12129_00319 CDS
T05790
Symbol
rpoH
Name
(GenBank) component of RNA polymerase
KO
K03089
RNA polymerase sigma-32 factor
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahn03021
]
NCTC12129_00319 (rpoH)
Transcription machinery [BR:
ahn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC12129_00319 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
Sigma70_r1_2
HTH_AsnC-type
HTH_10
UCR_14kD
HTH_3
HTH_25
Rv2175c_wHTH
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
VDZ71267
LinkDB
All DBs
Position
1:302876..303733
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AA seq
285 aa
AA seq
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MTKEMQTLALAPVGNLESYIRAANAWPMLSAEEERTLAEKLHYQGDLEAAKKLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDMSSDDDASDGQPMAPVLYLQDKSSNFADGIEDDNWEEHAADKLSDAMLGLDERSQQI
IRARWLDEDSKTTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagcgctcgctccggtcggcaacctggaatcttacatc
cgggccgccaacgcctggccgatgttatcggctgaggaagaacggacacttgctgaaaag
ctgcattaccagggcgatctggaagcagcgaaaaagctgatcctgtctcacctgcgattt
gttgttcatatcgctcgtaattacgcgggctatggcctgccgcaggcggatctcattcag
gaaggtaatatcggcctgatgaaagccgtacgtcgcttcaaccctgaagtgggcgtacgt
ctggtgtccttcgccgtacactggatcaaagcggaaattcacgaatacgtgctgcgtaac
tggcgtattgtgaaagtagctaccaccaaagcgcagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggtttaatcaggatgaagtggaaatggtagcgcgcgag
ctgggtgtaaccagcaaagacgtccgtgaaatggagtcgcgcatggcggcccaggacatg
acgtttgatatgtcatcagacgacgatgcatccgatggacagccaatggccccggtactc
tatctgcaggataaatcctcaaactttgccgacggcattgaggacgataactgggaagag
cacgcggcggataaactgtctgatgcgatgctgggtctggacgagcgcagccaacaaatc
attcgtgcccgctggctggatgaagacagcaaaaccacattgcaggaactggccgatcgt
tatggcgtctctgccgaacgtgtgcgccagcttgaaaagaatgcaatgaagaaactgcgc
gccgctatcgaagcctga
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