Atlantibacter hermannii: NCTC12129_00575
Help
Entry
NCTC12129_00575 CDS
T05790
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahn03000
]
NCTC12129_00575 (treR)
Transcription factors [BR:
ahn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NCTC12129_00575 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_31
HTH_23
HTH_7
HTH_3
HTH_IclR
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
TrmB
HTH_Crp_2
MarR
HTH_26
CENP-B_N
HHH
HTH_AraC
HTH_36
Motif
Other DBs
NCBI-ProteinID:
VDZ71513
LinkDB
All DBs
Position
1:complement(523564..524511)
Genome browser
AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMRQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPCLYEQGYDPIMMESQFSAARVEEHLRILRQRKID
GVILFGFTGLNDAALTSWRDMLVLIARDAPGFASVCYDDEGAIQNLMQRLYQAGHRHISY
LGVPHSDVTTGMRRHHSYLAFCEAHHLTPLATLPGLAMKQGYEHVSEVLNSDTTALVCAT
DTLAIGASKFLQQHHAAPVQLASVGNTPLLKFLHPEIITVDPGYAEAGRQAALQLIAQIT
QSGDPQQIVIPSSVM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaagacattgcgcgcttaagcggcgtaggcaaatccacc
gtgtcacgcgtccttaacaatgagagcggcgtcagcgagcgcacccgcgagcgtgttgag
gcggtgatgcgccagcatgggttttccccttcccgctcggcgcgtgctatgcgcggccag
agcgacaaagtcgtggcgattattgtcacccgtctggattccctgtctgaaaacctcgcc
gtccagaccatgctgccctgtttgtatgagcagggttacgatcccatcatgatggaaagc
cagttctctgcggcgcgggtggaagagcacctgcgcatcctgcgccagcggaaaatcgac
ggggtgatcctgtttggctttaccgggctgaatgacgcggcgcttacttcctggcgggac
atgctggttctgattgcgcgggatgcgccgggatttgcttcggtgtgttatgacgacgaa
ggggcgatccagaacctgatgcagcgcctgtatcaggcgggccatcgccatatcagttat
ctcggcgtaccacacagcgacgtgaccaccgggatgcgccgccatcattcctatctggcc
ttttgtgaggcgcaccatctgacacctctcgcgacgctgccgggcctggcgatgaaacag
ggctatgaacatgtttctgaggtattgaatagcgacaccaccgcgctggtgtgcgccacg
gataccctggcgatcggcgccagtaagtttctacagcagcatcacgctgcgcccgttcag
cttgccagcgtcggcaatacgccgttgttgaagtttctgcacccggaaattatcactgtc
gatcccggttatgccgaagccggacgccaggcggcattgcagttgatcgcccagatcacc
caaagcggcgatccgcaacagatcgtgatcccctcctccgtgatgtga
DBGET
integrated database retrieval system
