Atlantibacter hermannii: NCTC12129_00638
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Entry
NCTC12129_00638 CDS
T05790
Symbol
lsrD_1
Name
(GenBank) ABC transporter permease
KO
K10557
AI-2 transport system permease protein
Organism
ahn
Atlantibacter hermannii
Pathway
ahn02010
ABC transporters
ahn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC12129_00638 (lsrD_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC12129_00638 (lsrD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahn02000
]
NCTC12129_00638 (lsrD_1)
Transporters [BR:
ahn02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
NCTC12129_00638 (lsrD_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
VDZ71574
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All DBs
Position
1:581587..582591
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AA seq
334 aa
AA seq
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MKVNWELALLALLVLEILLFGALNPRMLDINMLLFSTSDFICIGIVALPLTLVIISGGID
ISLGSTIGLCAIALGVLMQSGVPMSLAIVLTLALGLACGFLNAALIHYTGISPLVITLGT
LYLYGGGALLLSGMAGATGYEGIGGFPDSFTAFANATLLGLPVPLVMFLVITLLFWVLAH
RARFGRHLFLLGQNARAARYAALPVNGMLYGVYGLVGLASAIAAVVLVSYFGSARSDLGR
DLLMPALTAAVLGGANIYGGSGSVVGTALAALLVGYLQQGLQMVGIPNQVSSALSGALLI
VVVIGRSVSLHRETLRAAWRRVQIRRGAIKQSGA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaactgggaactggcgctgctggcgttgctggtactggaaattctgctgttc
ggcgcgctcaatccgcgcatgctcgacatcaatatgctgctgttcagcaccagtgatttt
atttgcatcggcattgtggcgctgccgctgacgctggtgattatcagcggcgggattgat
atttcgctcggctcaaccatcgggctgtgcgccatcgcgttgggcgtgctgatgcagtcc
ggcgtgccgatgagcctggcgattgtgttgactctggcgctgggcctggcctgtgggttc
ctgaacgcggcgcttattcattacaccggcatcagcccgctggtgatcaccctcggcacg
ctttacctctacggcggcggcgcgttgctgttgtccggtatggcaggcgcaaccggctat
gagggcatcggcggcttcccggacagcttcactgccttcgcgaacgccacgctgctgggc
ctgccggtgccgctggtgatgttcctggtgatcaccctgttgttctgggtgctggcgcac
cgcgcccgctttggccgtcatctgtttttgctggggcaaaacgcccgtgcggcacgctat
gcggcgctgccggtcaacgggatgctgtatggcgtttacggtctggtcgggctggcatcg
gccatcgcggcggtggtgctggtctcttattttggttcagcccgctcggatttagggcgc
gatttgctgatgcccgcgctgacggcggcggtgctgggcggcgccaacatctatggcggt
tcaggttctgtggtgggtacggcgctggcggcgttgctggtggggtatttgcagcagggg
ttacaaatggtcgggatacccaatcaggtatcgagcgcgttgtccggtgcgttgttgatt
gtggtggtgattggtcgttcggtgagtttgcatcgcgaaaccctgcgtgcggcatggcgc
cgcgttcagattcgccgcggtgccataaaacaatcaggagcttaa
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