Atlantibacter hermannii: NCTC12129_00639
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Entry
NCTC12129_00639 CDS
T05790
Symbol
lsrB_1
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10555
AI-2 transport system substrate-binding protein
Organism
ahn
Atlantibacter hermannii
Pathway
ahn02010
ABC transporters
ahn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC12129_00639 (lsrB_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC12129_00639 (lsrB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahn02000
]
NCTC12129_00639 (lsrB_1)
Transporters [BR:
ahn02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
NCTC12129_00639 (lsrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
RHD_dimer
Peripla_BP_1
Lipase_GDSL
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
VDZ71575
LinkDB
All DBs
Position
1:582593..583609
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AA seq
338 aa
AA seq
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MKTAKRVLQFSAMALALSVVTAQAADRIAFIPKLVGVGFFTSGGNGAKEAGKALGADVTY
DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDTKPE
CRSIYINQGTPQQLGGMLVDMASKQVTKPDAKVAFFYSSPTVTDQNQWVKEAKAKIAKDH
PQWQIVTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAAQAAENLKRTGVAI
VGFSTPNVMRPYVERGTVKAFGLWDVVQQGKIAVNVADALLKKGDLNVGDTVDVKDIGPL
KVEPNSVQGYDYEAKGNGIVLLPERVVFTKDNINKYDF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcaaaacgtgtgctgcaatttagtgcgatggcactggccttgagcgtcgtg
actgcccaggcggcggatcgcatcgcttttattcccaagctggtcggcgtcgggttcttc
accagcggcggtaatggggcgaaagaggcgggcaaagcgctgggggcggatgtcacctat
gacgggccgacggaaccgagcgtgtcgggccaggtgcagttgatcaacaacttcgtcaac
cagggctataacgccattatcgtctcggcggtctccccggatggcctgtgcccggcactg
aagcgcgccatgcagcgtggcgttaaagtcctgacctgggactcagacaccaaaccggaa
tgccgcagtatttacatcaaccagggcaccccgcagcagctgggcggcatgctggtggat
atggcatcgaaacaggtgaccaaaccggatgcaaaagtcgcgtttttctactccagcccg
accgtgaccgaccagaaccagtgggtgaaagaggccaaggcgaaaatcgcgaaagatcat
ccgcagtggcaaatcgtgaccacccagtttggctataacgatgccactaaatccctgcaa
accgctgaggggatcttaaaagcgtatccggatctggacgcgatcatcgcgccggacgcc
aacgcgctgcccgcagccgcccaggccgcggaaaacctgaagcgcaccggcgtggcgatt
gtcgggttcagtaccccgaacgtgatgcgcccgtacgtggagcgcggcacggtaaaagcc
ttcggcctgtgggacgtggtgcaacagggcaaaattgccgtcaacgtggcggatgcgctg
ttgaagaaaggcgatcttaacgtgggcgacacggtggatgtgaaagatatcggcccgctg
aaagtggagccgaacagcgtacaaggctatgactacgaagcaaaaggcaacggtatcgtg
ctgctgccggaacgcgtggtcttcaccaaagacaacatcaacaaatacgacttctga
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