Atlantibacter hermannii: NCTC12129_00686
Help
Entry
NCTC12129_00686 CDS
T05790
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn03030
DNA replication
ahn03430
Mismatch repair
ahn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12129_00686 (holD)
03430 Mismatch repair
NCTC12129_00686 (holD)
03440 Homologous recombination
NCTC12129_00686 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahn03032
]
NCTC12129_00686 (holD)
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_00686 (holD)
Enzymes [BR:
ahn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12129_00686 (holD)
DNA replication proteins [BR:
ahn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12129_00686 (holD)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12129_00686 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
CSTF_C
Motif
Other DBs
NCBI-ProteinID:
VDZ71618
LinkDB
All DBs
Position
1:622744..623157
Genome browser
AA seq
137 aa
AA seq
DB search
MTSRRDWQLQQLGITQWVLRRPTALQGEIAISLPAHVRLVMVAELLPALTTPLIRDLLLA
LGVTPDQVLPLTPDRVEMLPPDSQCLSIWLGVEPLTSLAGTALHTLTLDALRQDPAARAA
LWQQICEHEHDLFTHKQ
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccgacgcgactggcaattacagcaactgggcatcacccagtgggtactgcgt
cgtccgacggcgttgcagggcgaaattgcgatttcgctgccagcgcatgttcgtctggtg
atggtcgcggaactactgccggcgctcacgacgccacttatccgcgatttgctgctcgca
ctgggcgtcacacccgatcaggttttgccgctgacgccggatcgtgtggaaatgctgccg
cccgatagccagtgcctgagtatctggctcggcgtagaacctctgacctcactggcaggc
accgcattacacacgctaacgctggatgcgctgcgccaggaccctgcggcgcgggccgcc
ttatggcaacaaatttgcgaacatgaacacgatctctttactcacaagcagtga
DBGET
integrated database retrieval system
