KEGG   Atlantibacter hermannii: NCTC12129_00798
Entry
NCTC12129_00798   CDS       T05790                                 
Symbol
icsA
Name
(GenBank) putative outer membrane autotransporter barrel, putative pectin lyase fold
  KO
K12678  autotransporter family porin
Organism
ahn  Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:ahn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ahn02000]
    NCTC12129_00798 (icsA)
   02044 Secretion system [BR:ahn02044]
    NCTC12129_00798 (icsA)
Transporters [BR:ahn02000]
 Other transporters
  Pores ion channels [TC:1]
   NCTC12129_00798 (icsA)
Secretion system [BR:ahn02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   NCTC12129_00798 (icsA)
SSDB
Motif
Pfam: Autotransporter AC_1 PATR Pertactin
Other DBs
NCBI-ProteinID: VDZ71728
UniProt: A0A447LJ17
LinkDB
Position
1:735841..739425
AA seq 1194 aa
MTVTGDGSFQRSVRVESGTLRFAPANRFQVSDSLITAGGATTSVAGASQVNVAGTLVQQP
NAIFEASLDATRPAATASTFSLAGTLNLSGAPGSASAITRKLLTVLQSPNPAGISGDFTA
FGLSNPADYLVVSGAKANNDSDYIVAFGLRWLMGLEQGNGTFTLLNPQDIFNVDVALEDQ
SGPFASGWDGASLTKAGAGTLVLSRQNTFTGNTVINGGVLQTDSENAIAQSANVSVNPGA
TLNLNNFSQRLSHLSGAGAITLGSATMTVNNTVDSVFNGPISGSGSVLKTGVASLTLGGE
NTFSGGLRIDAGTTVVKRGAALGAGPVVNNATLSLDLASASVLRNLFSGNGVLNKDGAGI
ALLTQSGSSAGDININNGALAFGQGVSFNSRGDVTTAPSATAVFNAGASLQVDGNFAQQG
ALDVVLSATEPTISASTASLGNNASLNIVGVNFPDDIFSFENRAVIQTTSPGALLGDFSR
LRIGGASSAVDYASVTGYKDVLSRKYSVDFLLSWYAARSDTPERAHGTFTLTNPEERFEL
NTPLINQPTSAATGWDGTTLTKAGEGTLILSRRNFYTGPTLLNDGILQAGIENALARSSA
LRIASGAAFILDGYDQTVNNLSGDGNILLGDAQLTLNNSSDTRFAGVISGNGAVEKTGAN
TLQLTSDQTWPGPTTINSGTLILGNGPDETATLASAQVAIAPGAILGGYGGTGGDIINQG
TLAIADALPQFADGPAGNFNVGGNLVNSGNIVMASPWPASTLTVAGNYTGNNGLVTLSTV
LGGDDSPTDRLVIEGDSRGNTQLKINNSGGQGALTQQGIEVISVAGQSTGVFTLAERVVA
GSYEYFLQQGLPTAPNGNWYLRSQLPVPPSPTPPQPPQPAAPIVRPEAGSYLANLATAQQ
LFAQQLSDRSGKADNSSLWLRQNGMRRSGYDNSGQLKTTANSYLIQGGGEVLAGQFTRDD
SLRIGVMLGYGTAQNHTRSGRSDFRSQGKIDGYSAGIYGTWYQDATRQQGLYVDSWLQYS
WLDAHVKGDDLPQEHYRLNGLSGSLETGYRWDIVDDDSGAVALTPQAQVIWSGIDANDHR
ESSGTRVTSTADNPLQTRLGIALSHHGAASRDNVRGKTFTTYVAANWLHNTSLSTVAMND
DHVGFAGERNRGEIRLGINGNLSPQWDVWGTIAQQMGDSGYHATAGGLGARYRF
NT seq 3585 nt   +upstreamnt  +downstreamnt
gtgacggtaacaggggatggctcgttccagcgtagcgtgcgcgtcgagagcgggacgctg
cgctttgccccggcgaaccgatttcaggtgagcgacagtttgatcaccgcaggcggggcc
actacctccgtcgcgggcgcatcgcaggtcaatgttgccgggacgctggtgcagcagccg
aatgccatttttgaggcatcgctggatgcgacgcggccagcggccaccgcatcgacattc
tcactggcgggtacgctcaatctgagcggcgcaccgggttcagccagcgccatcactcgc
aagcttttgacggtgttacagagcccgaatcccgcgggtatcagcggagatttcacggcg
tttgggttgagtaatccggcagattatctggtggtgtccggtgcgaaagccaataacgac
agcgattatatcgttgcctttggcctgcgctggctgatggggctggagcagggaaacggg
acgttcaccctgcttaacccacaggatatcttcaatgtggatgtggcgctggaagaccag
tcaggcccttttgccagcggctgggacggggcttcattaacgaaagcgggcgcgggcacg
ctggtgttatcgcgccagaacacgtttaccggcaataccgtcatcaatggcggggttctg
caaaccgacagcgaaaatgcgattgcgcagtccgccaacgtctcggtcaatccgggcgcg
accctgaaccttaataacttctcgcaacggctctctcacctgagcggcgcaggtgcgatt
acgttgggcagcgcgaccatgacggtgaataacaccgtagacagcgtgtttaacggcccg
atttcaggtagcggcagtgtgttgaaaactggcgtggcgtcgctcacgcttgggggcgaa
aatacttttagcggagggctgcggattgacgccggaacaacagtagttaaacgcggggcg
gcgttgggcgccggtccggttgtgaataacgccacgttatccctggatctcgccagcgcc
agcgtgctacgtaacttgttttccggcaatggcgtgctcaataaagacggagcggggatc
gcgttgttaacgcaatcaggctcatcggcgggcgatatcaatatcaacaatggcgcgctg
gcatttggccagggcgtaagcttcaacagccgcggcgatgttacgacggcgccctccgca
acggcagtatttaacgcaggagcatcgctgcaggttgacggaaatttcgctcagcaaggc
gcgctggatgttgtgctgagcgcaaccgaacctactatcagcgcctcaaccgcatcgctg
ggtaataatgcctcgcttaatatcgtgggcgtgaactttcccgatgacattttttcattt
gaaaatcgggctgttattcagacgacgagccccggcgcgctgcttggcgacttttccagg
ctgcgcattggcggggcgtcgtcagcggtcgattatgcctctgtgaccggttataaagat
gtgttaagcagaaagtacagcgtcgactttctgctttcctggtatgccgcccgttcagat
acgccggaacgggcacatggcacctttaccctgaccaatcccgaagagcgtttcgaactc
aatacgccactgattaatcagcccaccagtgcggcgacgggctgggatggcaccacgcta
accaaagccggcgagggcacgctgatattatcccggcgtaatttctataccgggcccaca
ttgctcaatgacggtattctgcaggccggtattgagaatgccctggcccgcagcagcgcg
ttgcgtattgcatccggcgcggcctttatactggacgggtacgatcaaaccgttaataac
ctctctggcgacggcaatatactgctgggcgacgcgcagttaacgctcaataacagcagc
gacacgcggtttgccggtgtgataagcggtaacggggcagtggagaaaaccggtgcaaat
acccttcaactgacaagcgatcaaacctggcctggcccgacgaccattaacagcggcact
ctgattctgggcaacggccctgatgaaaccgctacgcttgccagtgcccaggtcgccatc
gcgccaggggcgattctgggcggttacggcggaacgggcggcgatatcattaaccaggga
acgttggcgattgccgatgcactgccgcagtttgccgacgggcccgctggtaattttaac
gtaggcggcaacctcgttaattcaggaaatattgtgatggccagtccgtggcctgccagc
acgttgacggtagcggggaattataccggcaataatgggctggtgacgctcagtacggtg
ttaggcggcgacgactcgccaaccgaccgtttagtgattgagggcgacagccgtggcaat
acgcagctaaaaatcaacaattcaggcggccagggcgcgctgacgcagcagggcatagaa
gttatcagcgtggcgggccagtcgacaggggttttcacgctggcggagcgtgtagtggca
ggttcgtatgagtacttcctccagcaagggttgccgacggcgccaaacggtaactggtat
ttgcgcagccagcttcccgtgccgccgtctcccactcctccgcagccacctcagcctgcg
gccccgatcgttcgtcccgaagcggggagttatttggcgaatctcgccactgcgcagcag
ttgtttgcgcagcagttgtcggatcgcagcggtaaagcggacaactcaagcctctggctg
cggcaaaatggcatgcgccgcagcggctacgataacagcggccagttaaaaaccacggca
aacagctatctgattcagggcgggggcgaggtactggcgggccagttcacccgtgacgat
agcctgagaatcggcgtaatgctgggttacggcactgcacaaaaccatacccgttccgga
cgcagcgattttcgttcacagggcaaaattgatggttacagcgccggtatctacggcacc
tggtatcaggatgccacccgccagcaaggcttgtatgtggatagctggttgcagtacagc
tggctggatgcgcacgtcaaaggcgacgatctgccccaggagcattatcgtcttaatgga
ctgagcggttcgctggagaccggctatcggtgggatattgtcgatgacgacagcggcgca
gtggcgctgaccccgcaggcacaggttatatggagcggtattgacgcgaatgatcatcgg
gaaagcagcggtacgcgggtgacatcaacagccgataaccctttgcaaacccggctgggg
attgcgctgtcacaccacggcgcagcaagccgggataacgttcgcgggaagacgtttacg
acgtatgtcgcggcgaactggctgcataatacgtcgctcagcacagtggcaatgaatgac
gatcacgttgggtttgctggtgaacgtaataggggtgaaatcagactgggtattaacggc
aacctgtcgccgcagtgggatgtctggggcaccattgcccaacagatgggcgacagcggt
tatcatgcgactgccggaggattgggtgccagatatcgcttttaa

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