Atlantibacter hermannii: NCTC12129_00870
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Entry
NCTC12129_00870 CDS
T05790
Symbol
speC_1
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn00330
Arginine and proline metabolism
ahn00480
Glutathione metabolism
ahn01100
Metabolic pathways
ahn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
NCTC12129_00870 (speC_1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
NCTC12129_00870 (speC_1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
NCTC12129_00870 (speC_1)
Enzymes [BR:
ahn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
NCTC12129_00870 (speC_1)
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Ortholog
Paralog
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Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
VDZ71798
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All DBs
Position
1:797229..799364
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AA seq
711 aa
AA seq
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MKSLKIAASHDIVSVLSTHREVVTLDNTDFTDVAAVVLTVADTRSGILALLKRTGFNLPV
FVLSETPLELEAITGVIDGKAQSFLELEAAATRYEETLLPPFFDTLYQYVEMQNSTFACP
GHQHGEFFKKHPAGRQFYDFFGANVFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFNA
DKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNPF
GFIGGIDEHCFDETYLRELIREAAPERADEARPFRLAVIQLGTYDGTIYNARQVIDKIGH
LCDYILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKK
DNHLRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVALGI
DARKAILSQCSLIKPFVPPLVDGKPWQDHPTAQIASERRFFSFIPGERWHGFEGYADAQY
FVDPCKLLLTTQGIDPQTGDYAAFGVPATILANYLRENGLVPEKADLNSILFLLTPAESP
EKMAHLVALLAQFERHIELDSPLAEVLPTLWQKYSVRYKGYTLRQLCQEMHDLYVSFKIK
DLQKAMFRKAELPQVVMNPQDANREFIRGNVELVRIRDAAGRIAAEGALPYPPGVLCVVP
GEVWGGAVQRYFLALEESVNMLPGFSPELQGVYSETDADGIKRLYGNVLKA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgttaaaaatcgcagccagtcacgatattgtcagcgtgctttccacccatcgc
gaagtggtgaccctggataatactgactttactgatgtcgccgccgtggtgcttaccgtt
gccgatacgcgcagtggcattctggcgttgcttaaacgcaccgggtttaacctgccggtt
ttcgtgctgagcgagacgccgctggaactggaggcgattaccggcgtgattgacggtaaa
gcccagtcgtttcttgagctggaagccgcagcgacgcgttatgaagaaaccctgctaccg
ccgtttttcgacacgctgtaccagtacgtcgagatgcaaaacagcacgttcgcctgcccg
ggccatcagcacggcgagttttttaaaaagcatcccgcaggacggcagttttatgatttc
ttcggtgcgaatgtgtttcgtgccgacatgtgcaacgccgatgtgaaactgggtgatttg
ctgatccatgaaggatcggccaaacatgcccagaagtttgctgccaaagtgtttaatgcc
gataaaacgtatttcgtgctaaacggcacatccgctgctaacaaagtggtgaccaatgcg
ctgctgacccgtggcgacctggtgctgttcgaccgcaataaccataaatcaaaccaccac
ggcgcgttgatccaggcaggcgcgacgccggtgtatctggaggcggcacgcaatccgttt
gggtttatcggcgggattgatgagcactgcttcgatgaaacgtacctgcgtgagttgatc
cgcgaagccgcgcccgagcgtgccgatgaggcgcgcccgttccgcctggcggtgatccaa
ctgggtacttacgatggcaccatctacaacgcccgtcaggtcatcgataaaatcggccat
ctttgcgattacatcctgtttgattctgcctgggtgggttacgaacagtttatcccgatg
atggcggactgttcgccgctgttgctggaactgaacgaaaacgatccggggatttttgtg
acccagtcggtccataaacagcaggcgggcttttcccaaacttcgcaaatccataagaag
gataaccacctgcgcgggcaggcgcggttttgcccccataagcgtctgaacaacgctttt
atgctgcatgcctccaccagcccgttttatccgctgttcgccgcgctggacgttaacgcc
aaaatccacgaaggcgaaagcggtcgtcggctttgggccgagtgcgtagccctgggcatc
gacgcgcgtaaagccatcctgagccagtgttcgctgatcaaacctttcgtgccgcccctg
gtggacggcaagccctggcaggatcatcccaccgcgcaaatcgcctccgagcgtcgcttc
ttcagctttatccctggcgaacgctggcacgggtttgaaggctatgccgatgcgcaatat
tttgtcgatccctgcaagctgctgctcaccacgcagggtatcgatccacaaaccggcgac
tatgccgcgttcggcgtgccggcgaccattctggcgaattatctgcgcgagaatggcttg
gtgccggagaaagccgatcttaactcgatactgtttctgctaacgccggcggaaagcccg
gagaaaatggcccatctggtggcgttactggcgcagtttgaacgccatattgagctcgat
tcgccgctggccgaggttctgccgaccctgtggcaaaaatattcggtgcgttataaaggc
tacacactgcgccagctgtgccaggaaatgcacgatctctacgtcagttttaagatcaaa
gatctgcaaaaagcgatgttccgcaaagccgaattgccacaggtggtgatgaacccgcag
gacgcaaaccgcgaatttattcgcgggaatgtcgagctggtacgcattcgcgacgccgcc
gggcgcatcgcggcagaaggcgcgttgccttatccgccgggggtgctgtgcgtggtgcct
ggcgaagtgtggggcggggcggttcagcgttatttcctggcgctggaagagagcgtgaat
atgctgccaggcttctcaccagagctacagggcgtgtacagcgaaaccgatgccgacggg
ataaaacggctctatgggaatgtgttaaaagcataa
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