Atlantibacter hermannii: NCTC12129_01180
Help
Entry
NCTC12129_01180 CDS
T05790
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_01180 (sbcD)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12129_01180 (sbcD)
Archaeal homologous recombinant proteins
NCTC12129_01180 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
dDENN
Motif
Other DBs
NCBI-ProteinID:
VDZ72096
LinkDB
All DBs
Position
1:complement(1092542..1093759)
Genome browser
AA seq
405 aa
AA seq
DB search
MMRILHTSDWHLGQNFYTKSRAPEHQAFLTWLRQTAADQQVDAIIVAGDIFDTGSPPSYA
RELYNRFVVELQQTGCELIVLAGNHDSVATLNESRELLACLNTRVIASAQLQPEGQAIIL
NKRNGEPGAVLCPIPFLRPRDITKSRAGESGSEKQLQLLDAITLHYQACFDAACQLRGEQ
ALPIIATGHLTALGVTKTDAVRDIYIGTLDAFPASNFPEADYIALGHIHRAQTVAQSEHI
RYCGSPIPLSFDETGSPKVVNLVEFSGASLTKVTPLAVPVTQPLAMIKGTLAQIEQQLQQ
WRDAPAEPKTWLDIEIVSDDFLHDMQRQIVALTEALPVEVILLRRSREQRDLAIARLETE
TLSELSVAEVFERRLQSEALEESEAARLRTLFAQTLETMQQEENA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcatccttcacacttcagactggcacctcggtcaaaatttttacacgaaaagc
cgcgcgccggaacatcaggcgttcctaacgtggctgcgccagacggccgccgaccagcag
gtggatgcgattatcgtggcgggcgatattttcgataccggttctccccccagctacgcc
cgcgagctgtataaccgttttgtggtggagctccagcaaaccggctgcgagttaattgtg
ctggcgggaaatcatgattccgtggcaacgctgaatgaatcccgtgaactgctggcctgc
ctgaatacccgggtgatcgccagcgcccagcttcagccggaaggccaggcgatcattctg
aataaacgtaatggcgaaccgggcgcggtgctgtgccccatcccttttttacgcccgcgt
gacatcaccaaaagccgcgctggcgaatcgggaagcgagaaacaactgcaactgctggac
gccattaccctgcactatcaggcctgttttgacgccgcctgccagttgcgtggcgaacag
gctttgccgattatcgcgaccggccatttaacggcgctcggcgtgaccaaaaccgatgcg
gtgcgcgacatttacattggcacgctggatgcctttccggcgagcaatttcccggaggct
gattacattgcgctgggccatattcatcgcgcccagacggtggcgcaaagcgaacatatc
cgttattgcggctcgccaatcccgttaagctttgatgaaaccggcagcccgaaggtggtc
aatctggtggaattctccggcgcatcactgacgaaggttacgccgctcgcggtgccggtg
actcagccgctggcgatgattaaaggcacgctggcgcaaatcgaacagcagctccagcag
tggcgagatgcgcctgctgagccgaaaacctggctggacatcgaaatcgtcagcgatgat
tttttgcatgatatgcagcgccagatcgtcgccctgaccgaggcgttgccggtggaagtg
attttgctgcgccgcagtcgcgaacagcgcgatctggctattgcccggcttgagaccgag
acgttaagcgagctcagcgtcgcggaagtgtttgaacgccgcctgcaaagcgaagcgctg
gaagagagtgaagccgcccggttgcgaacgctgttcgcccaaaccctggagacgatgcag
caggaggaaaacgcatga
DBGET
integrated database retrieval system
