Atlantibacter hermannii: NCTC12129_01208
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Entry
NCTC12129_01208 CDS
T05790
Symbol
xseB
Name
(GenBank) exonuclease VII
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC12129_01208 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_01208 (xseB)
Enzymes [BR:
ahn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCTC12129_01208 (xseB)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC12129_01208 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF6687
KxDL
DASH_Dad2
Motif
Other DBs
NCBI-ProteinID:
VDZ72124
LinkDB
All DBs
Position
1:complement(1123389..1123631)
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AA seq
80 aa
AA seq
DB search
MPKKNDLPASFETALQELEQIVSRLESGALPLEEALNEFERGVQLARQGQVKLQQAEQRV
QILLSESEDAPLSPFQPDAE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaaaaacgacctccccgccagctttgagacggcgttgcaggagcttgagcag
attgtcagccgtctggaaagtggcgcattgccgcttgaagaggcgcttaacgaattcgaa
cggggcgtgcaactggcgcgccaggggcaggtcaaactgcaacaggctgagcaacgtgtg
cagatcctgctgtcagaaagtgaagacgccccgctctcccctttccaaccggatgcggaa
taa
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