Atlantibacter hermannii: NCTC12129_01250
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Entry
NCTC12129_01250 CDS
T05790
Symbol
ppiD
Name
(GenBank) peptidyl-prolyl cis-trans isomerase D
KO
K03770
peptidyl-prolyl cis-trans isomerase D [EC:
5.2.1.8
]
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ahn03110
]
NCTC12129_01250 (ppiD)
Enzymes [BR:
ahn01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
NCTC12129_01250 (ppiD)
Chaperones and folding catalysts [BR:
ahn03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
NCTC12129_01250 (ppiD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SurA_N_3
SurA_N_2
Rotamase_2
Rotamase_3
Rotamase
SurA_N
DUF4214
CFTR_R
DUF7750
Motif
Other DBs
NCBI-ProteinID:
VDZ72165
LinkDB
All DBs
Position
1:1165257..1167131
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AA seq
624 aa
AA seq
DB search
MMDNLRTAANSVVLKIIFGIIIVSFILTGVSGYLIGGNSNYAAKVNGEEISRGQFENAVA
SERNRQQQQLGDQYSELAANENYVKAMRQQVLSRMIDEALLDQYAKKLGLGISDEQIKQA
IFKEPAFQSNGKFDNARYTSIINNMGMTPDQYAQALRNQLMTQQLINAVVGTDFMLANET
DELAALVAQQRVVREATIDVNALAAKQTVSDSEVNSFYEQNKNRFIAPEQFRVSYIKLDA
AAMNENASDEEIQAWYDEHQDQYTQPQRKRYSIIQTKTEDEAKAVLDALKAGSDFATLAK
QKSADIISARNGGDMGWLEDATTPEELKNAGLNEKGQLSGVIKSSVGFLVARLDDVQPAQ
VKPLAEVRQAIADKVKQEKGLTAYFALQQKVSDAASNDNESLAGAEQAAGVKAVETGWFG
RDNLPEELNFKPVADAIFNGGLVGENGTPGSNSDIITVEGDRAFVLRVTEHKPEAVKPLA
EVRDQAVADIKHQKAEQQAKLDADKLISALKAGKGDDALKTAGLSFGTAKTLSRSGQDPI
SQVAFTLPLPAKDKPSYGVANDMQGNVVIVALDEVRSGTLPDEQKKAMTQGITQNNAQIA
FDALMTNLRKEAKIKMGDIIEQQQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaacttacgtacggccgcgaacagcgtcgtactcaagattattttcggtatc
attatcgtgtcgttcatattgaccggcgtgagcggctacctgattggcggtaacagtaat
tacgccgcaaaagtgaacggcgaagagattagccgcggccagtttgaaaatgcggtcgcc
agcgagcgtaatcgtcaacaacagcagcttggcgatcaatactctgaactggctgccaat
gaaaactacgtcaaagccatgcgccaacaggtgctgtcgcgcatgatcgatgaggcgctg
cttgatcagtatgcgaaaaaacttggcctcggcatcagcgacgaacaaatcaaacaggcg
atttttaaagaacccgccttccagtctaacggcaaattcgataacgcccgttatacctcc
atcatcaataacatgggcatgacgccagaccagtatgcccaggcgctgcgtaatcaatta
atgacgcaacagctgatcaacgccgtggtcggcaccgatttcatgctggctaacgaaacc
gatgagctggcagcgttggttgcgcagcagcgtgtcgtacgtgaagcgacgattgatgtt
aatgctcttgccgccaaacagacggtgagcgatagcgaagttaacagtttctatgagcag
aacaaaaaccgctttatcgcgccggaacagttccgtgttagctacatcaaacttgatgcc
gctgccatgaacgaaaacgccagcgatgaagagatccaggcctggtacgatgaacatcag
gatcagtacacccagccgcaacgcaaacgctacagcatcatccagaccaaaacggaagat
gaagccaaagcggtgctggatgccctgaaggccggttccgattttgctacgctcgcgaag
caaaaatccgctgatattatttctgcccgcaacggcggcgatatgggctggctggaagat
gcgacgacgccggaagaactgaaaaacgctggtctgaacgaaaaaggccagttgtcgggc
gtgattaaatcctctgtcggcttcctggtggctcgccttgacgacgtgcagcccgcccag
gtaaaaccgctggcggaagttcgccaggccattgctgataaagtaaaacaggagaaaggg
ctgacggcctatttcgccctgcagcagaaagtgagcgatgcggcgagcaatgataacgaa
tccttagcgggtgcagagcaggccgcgggcgtgaaagccgttgaaactggctggtttggc
cgtgataacctgccggaagagctgaatttcaaaccggtagcggatgcgattttcaacggt
ggtttggttggtgaaaacgggacgccgggcagcaactccgacattatcactgtcgaaggc
gatcgtgcatttgtgctgcgtgtgaccgagcataaacccgaggcggttaaaccgttggcg
gaagtccgcgatcaggctgttgctgatatcaagcatcagaaagcggagcagcaggccaaa
ctggacgccgacaagttgattagcgccttgaaagcaggtaaaggcgatgatgcgctgaaa
acggcaggcctgagttttggtactgccaaaacgctgagccgtagcggtcaggacccgatt
tcacaggtggcattcacattgccgttacctgctaaagacaaaccgtcctacggtgtggct
aacgatatgcagggcaatgtggtgatcgtcgcccttgatgaagtccgtagcggcacgctg
ccggacgagcagaagaaagccatgacgcagggcatcacgcaaaacaacgcgcaaatcgcc
ttcgatgcgctgatgaccaatctgcgcaaagaagcaaaaatcaaaatgggcgacatcatc
gagcagcagcaataa
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