Atlantibacter hermannii: NCTC12129_01586
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Entry
NCTC12129_01586 CDS
T05790
Symbol
gyrA
Name
(GenBank) DNA gyrase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahn03032
]
NCTC12129_01586 (gyrA)
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_01586 (gyrA)
Enzymes [BR:
ahn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC12129_01586 (gyrA)
DNA replication proteins [BR:
ahn03032
]
Prokaryotic type
DNA Topoisomerases
NCTC12129_01586 (gyrA)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC12129_01586 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
VDZ72492
LinkDB
All DBs
Position
1:1465685..1468321
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AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVISACLAYIEDEDISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILSAFVRHRRE
VVTRRTVFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLIAQAWDLGNV
KAMLEGAGDDAARPEWLEPEFGIRDGKYWLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLTQIAELLHILGSADRLMEVIREELELVRDQFGDKRRTEITANSADINIEDLISQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYAEGVNVFMATASGTVKKTAL
KEFSRPRTAGIIAVNLNEGDELIGVDLTSASDEVMLFSAQGKVVRFKDDAVRPMGRTATG
VRGIRLMDGDSVVSLIVPRGEGAILTVTQNGYGKRTAADEYPTKSRATKGVISIKVTDRN
GPVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGTVAEGDDEIAPEADNDDDAADDAEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaattacaccggtcaacattgaggaagagctcaagagctcc
tatctggattacgcgatgtcggtcattgtcggccgtgcgcttccggatgtccgagatggc
ctgaaaccggtacaccgtcgcgtactttacgccatgaacgttttgggcaatgactggaat
aaagcctacaaaaaatccgcgcgtgtcgtgggtgacgtcatcggtaaataccacccccat
ggcgactccgcggtttatgacactatcgttcgtatggcgcagccgttttccctgcgttat
atgctggtcgatggccagggcaacttcggttccatcgacggcgactctgcagcggcgatg
cgttacaccgaaatccgcctggcgaaaatcgcccatgagctgatggccgatctcgaaaaa
gagacggtcgatttcgtcgacaactatgacggcacggaaaaaattccggacgttatgccg
accaaaattccgaacctgctggttaacggctcctccggtattgcggtgggcatggcgacc
aacatcccgcctcacaaccttactgaagtgatcagcgcctgcctggcctacattgaagat
gaagacatcagcgtagaagggctgatggagcacatcccgggtcctgatttcccgactgct
gcgatcatcaatggccgtcgtggtatcgaagaggcttaccgtaccggccgcggcaaaatt
tatattcgcgcccgcgccgaagtggaagtggacgcgaagtccggccgtgaaaccatcatc
gttcatgaaattccgtatcaggtgaacaaagcgcgcctgattgagaaaatcgccgagctg
gtaaaagacaaacgcgttgaaggcatcagcgcgctgcgtgacgagtctgataaagacggg
atgcgcatcgtgattgaaatcaaacgcgacgcggtgggcgaggtggtgctaaacaacctc
tactctcagactcagcttcaggtctctttcggcatcaacatggtggcattgcaccatggc
cagccgaagatcatgaccctgaaagagatcctgtcggcgtttgtccgtcaccgtcgtgaa
gtggtgactcgccgtaccgttttcgaactgcgtaaagcgcgcgatcgtgcgcatatcctt
gaagcgctggcgattgcgctggcgaacattgacccgattatcgagctgattcgccgtgcg
ccgaccccggcggaagcgaaagctggcctgattgcccaggcatgggatttgggcaatgtc
aaagcgatgctggaaggcgcaggcgatgacgctgcgcgtccggaatggctggagccggaa
ttcggtattcgcgatggcaaatactggctgaccgagcagcaggcccaggcgatcctggat
ttacgtctgcagaaactcaccggccttgagcatgaaaaactgctcgacgagtacaaagag
ctgctgacccaaatcgctgagctgctgcacattctcggcagcgccgatcgtctgatggaa
gtgattcgcgaagagctggaactggtgcgcgatcagtttggcgataagcgccgtactgaa
atcaccgccaacagcgccgatatcaatatcgaagatctgatcagccaggaagacgtggtc
gtcaccctgtcgcatcagggctacgtgaagtatcagccgctctccgattacgaagcgcag
cgccgtggcggtaaaggcaagtctgccgcacgcatcaaagaagaagactttatcgaccgc
ctgctggtggccaacacccatgacaccatcctgtgcttctcaagccggggccgtctgtac
tggatgaaggtctatcagctgccggaagcgagccgtggtgcccgtggacgtccaatcgtt
aacctgctgccgctggaagccaacgaacgtatcacggcgatcctgccggtgcgcgaatat
gccgaaggcgtcaatgtgtttatggcaaccgccagcggcaccgtgaagaaaaccgcgctt
aaagagttcagccgtccgcgtacggcgggtatcatcgccgttaaccttaacgaaggcgat
gagctgattggcgtggatctgacctccgccagcgatgaagtcatgctgttctccgcgcag
ggtaaagtggtgcgctttaaagacgacgcagtgcgtccgatgggccgtaccgcgaccggc
gtacgcggtatccgtctgatggacggcgacagcgtggtttcgctgatcgttccgcgtggc
gaaggcgcaatcctgaccgtgacgcaaaacggctacggcaaacgcacggcggcggatgaa
tatccgaccaaatcccgtgcgacgaaaggcgttatctccattaaagtcaccgatcgtaac
ggccctgtggtcggcgcggtgcaggtggatgactgcgatcagatcatgatgattaccgat
gccggtactttagtccgtacccgcgtatctgaaatcagcattgtgggtcgtaacactcag
ggtgtgatcctgattcgtaccgccgaagatgagaacgttgtgggtctgcaacgtgtcgcc
gaaccggtggacgacgaagagctggacagcatcgacggtactgtcgcagaaggcgatgat
gaaatcgcgccggaagcggataacgacgatgatgcagctgacgatgctgaagagtaa
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