Atlantibacter hermannii: NCTC12129_01677
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Entry
NCTC12129_01677 CDS
T05790
Symbol
nfo_1
Name
(GenBank) endonuclease IV Nfo
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12129_01677 (nfo_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_01677 (nfo_1)
Enzymes [BR:
ahn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NCTC12129_01677 (nfo_1)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC12129_01677 (nfo_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
VDZ72581
LinkDB
All DBs
Position
1:complement(1563614..1564045)
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AA seq
143 aa
AA seq
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MIENTAGQGSNLGFRFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTEADCEKTFAE
FERIVGFRYLRGMHLNDAKSAFGSRVDRHNSLGEGNIGHTPFSWLMRDPRFDGIPLILET
INPDIWAEEIAWLRAQQQEEAVV
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgagaataccgcaggccagggcagcaacctgggtttccgtttcgagcatctggcg
gcaattattgacggcgtggaagataaatcgcgcgttggggtgtgtattgatacctgccac
gctttcgccgcgggctacgatctgcgtaccgaagcggattgcgaaaaaaccttcgctgag
tttgagcgcatcgtgggtttccggtatttgcgcggcatgcacctgaatgatgcgaaaagt
gcgtttggcagtcgggtcgatcgccacaacagccttggcgagggcaacatcggccatacg
ccgtttagctggctaatgcgcgacccgcgcttcgatggtattccgttgatcctggaaacc
attaacccggatatctgggctgaagaaattgcctggctgcgggcgcagcaacaggaagaa
gcggtcgtttaa
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