Atlantibacter hermannii: NCTC12129_01747
Help
Entry
NCTC12129_01747 CDS
T05790
Symbol
alkA
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12129_01747 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_01747 (alkA)
Enzymes [BR:
ahn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NCTC12129_01747 (alkA)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC12129_01747 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
VDZ72648
LinkDB
All DBs
Position
1:1628260..1629114
Genome browser
AA seq
284 aa
AA seq
DB search
MFTIDYRGPYDWPWMCGFLRQRTVEGVEIIEERCLKRVMAFDDAQGLATLHLDGNDVLQV
TLSDGLLPVADEALARLRRWLDLDTDPYPMIQTLGELAAPKPGLRLPGCVDPFEQLIRAV
LGQLVSVAMAAKLTSKLVQAYGQPLEDAPGWRLFPDASILAAARWEDLKALGMSKMRADA
IIHLAQRCLEGQLMLSRPDDVTQGIKALMQLPGIGRWTASYFALRGWQSPDVFLSDDYAI
KLRFPGMTPAHIRRYAERWAPWRSYALLHIWYNPGWQPDQLIPK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtttactattgattatcgcggcccgtacgactggccctggatgtgtggttttttacgc
cagcgtaccgtcgaaggcgtcgaaatcattgaggaacgctgtctgaagcgggtaatggca
tttgatgatgcgcaggggctggcgacccttcacctcgacgggaatgatgtcctgcaggtg
acattaagcgacggtctgttgccggtggccgatgaggccctggcacgactgcggcgatgg
ctggatctggataccgacccgtatcccatgatccaaacgctgggcgagcttgccgccccg
aagccgggcctgcggctgcctggctgtgtcgacccttttgagcagttgatccgcgcggtg
ttagggcaactggtgagtgtcgcgatggcggccaaactgaccagtaaactggtgcaggca
tatggtcaaccgcttgaagatgcgccgggctggcgtctctttcccgatgcgtcgattctg
gccgccgcccgttgggaagatttgaaagcgctgggcatgtcgaaaatgcgcgccgacgcc
ataatccatctggcgcagcgctgtcttgaggggcaattaatgctgtcgcggccggacgat
gtgacgcagggcattaaagcattaatgcagttgcccggtatcgggcgctggaccgccagc
tactttgcgttacgcggctggcaaagcccggatgtgtttttgtcggatgactatgcgatt
aaactgcgttttcccggtatgacgcctgcacacatccggcgttacgccgagcgctgggcg
ccgtggcgctcgtacgcattactgcatatctggtataacccgggctggcagccggatcag
ttaatcccgaaataa
DBGET
integrated database retrieval system
