Atlantibacter hermannii: NCTC12129_01849
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Entry
NCTC12129_01849 CDS
T05790
Symbol
himD
Name
(GenBank) integration host factor
KO
K05788
integration host factor subunit beta
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahn03032
]
NCTC12129_01849 (himD)
03036 Chromosome and associated proteins [BR:
ahn03036
]
NCTC12129_01849 (himD)
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_01849 (himD)
DNA replication proteins [BR:
ahn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC12129_01849 (himD)
Chromosome and associated proteins [BR:
ahn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NCTC12129_01849 (himD)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NCTC12129_01849 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HAAS
FhbB
Motif
Other DBs
NCBI-ProteinID:
VDZ72749
LinkDB
All DBs
Position
1:1725903..1726187
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AA seq
94 aa
AA seq
DB search
MTKSELIERLATQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVDLEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgattgaaagacttgcaacccagcaatctcacatccctgcgaaa
gccgtagaagatgcggtaaaagagatgttggagcatatggcctctactctcgcacagggc
gagcgtattgaaatccggggtttcggcagtttttccttacactatcgcgctccgcgcact
ggccgtaacccgaaaacgggcgataaagtggatctggaaggtaaatacgttccgcacttt
aagccgggtaaagagttacgtgaccgcgccaatatttacggttaa
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