Atlantibacter hermannii: NCTC12129_01913
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Entry
NCTC12129_01913 CDS
T05790
Symbol
ycdC
Name
(GenBank) transcriptional regulator YcdC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahn03000
]
NCTC12129_01913 (ycdC)
Transcription factors [BR:
ahn03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
NCTC12129_01913 (ycdC)
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Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_21
CecR_C
Motif
Other DBs
NCBI-ProteinID:
VDZ72812
LinkDB
All DBs
Position
1:1796375..1797010
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AA seq
211 aa
AA seq
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MTQGSKNGGKRSKAVAAKRDAILQAGLSQFAKYGIHGATLEHIAECAGVSKTNLLYYFPS
KDVLYIEVLKQILSIWLAPLRAFRRDLEPLAAIGEYIRLKMEVSRDYPEASRLFCMEMLQ
GAPLLMGELDGDVRPLVEEKSAIVAAWVAQGKLAPVDPHHLIFMIWATTQHYADFSVQVE
AVTGATLKDDAFFRHTVENVQRMIIDGIRPR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacacagggaagcaaaaacggcgggaaacgatcgaaagccgtggcggcaaagcgggac
gctattttacaggccggtctcagccagttcgcaaagtacggcattcatggcgctaccctt
gagcacatcgccgaatgcgccggcgtgtcgaaaactaatctgctgtactattttccgtca
aaggacgttctttatatcgaggtactaaaacagattctgtcgatctggctggcgccgctg
cgggcgtttcgccgggatctggagccgctggccgccattggcgagtatatccggctcaag
atggaagtttcccgggattatcccgaggcttcacggctgttctgtatggagatgctgcag
ggcgcgccactgttgatgggcgaactcgacggggatgtgcgaccgctggtggaggagaag
tctgctatcgtcgctgcctgggtggcgcagggaaaactggcgcctgtcgatccccatcac
ctgatttttatgatttgggcgacaacccaacattacgcggatttttcagtgcaggtcgaa
gcggtaaccggcgccacgctaaaagatgacgccttttttcgccacacggtggaaaacgtc
cagcgtatgatcattgacggtattcgcccgcgttaa
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