Atlantibacter hermannii: NCTC12129_01981
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Entry
NCTC12129_01981 CDS
T05790
Symbol
ruvB_2
Name
(GenBank) holliday junction ATP-dependent DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12129_01981 (ruvB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_01981 (ruvB_2)
Enzymes [BR:
ahn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12129_01981 (ruvB_2)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12129_01981 (ruvB_2)
RecFOR pathway proteins
NCTC12129_01981 (ruvB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_4
RuvB_N
RuvB_C
AAA
DUF4129
Motif
Other DBs
NCBI-ProteinID:
VDZ72879
LinkDB
All DBs
Position
1:1864564..1865253
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AA seq
229 aa
AA seq
DB search
MCCLLMRSTVFSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSL
TSPLRDRFGIVQRLEFYQVPDLQHIVNRSAQHMGLDMSHEGALEVAKRARGTPRIANRLL
RRVRDFAEVRHNGVISQDVAAQALDMLNVDAEGFDYMDRKLLLAIIDKFFGGPVGLDNLA
AAIGEERETIEDVLEPFLIQQGFLQRTPRGRMATVRAWEHFGIKPPVLP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgtttattgatgagatccaccgtcttttctccggtggtggaagaggtgctgtat
ccggcgatggaagattatcagctggatatcatgatcggcgaaggaccggccgcacgctca
attaaaatcgatctgccgccctttaccttaattggcgcaaccactcgcgccgggtcactg
acctcgcccctgcgtgaccgtttcggtattgttcagcggctggagttctaccaggtgccg
gatttgcagcatatcgttaatcgcagcgcccagcatatggggctggatatgagtcatgaa
ggcgcgctggaagtggcgaaacgcgcccgtggtacgccgcgtatcgctaaccgtctgctg
cgccgggtgcgggattttgctgaagtccgccacaatggggtgatttctcaggacgtcgcg
gcccaggcgctggatatgcttaacgttgatgccgagggcttcgactacatggaccgcaaa
ctgctgctggcgatcattgataaattctttggcgggccggtggggctggataacctggcc
gcggcgattggcgaagagcgtgaaaccatcgaagatgtactagagcccttcctgatacag
caaggctttttgcaacgcacgccgcgtgggcgtatggcgacggtacgcgcctgggaacat
ttcggcattaagccgccggtgttgccgtaa
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