Atlantibacter hermannii: NCTC12129_03384
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Entry
NCTC12129_03384 CDS
T05790
Symbol
ybiS
Name
(GenBank) L,D-transpeptidase
KO
K19235
L,D-transpeptidase YbiS
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ahn01002
]
NCTC12129_03384 (ybiS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahn01011
]
NCTC12129_03384 (ybiS)
Peptidases and inhibitors [BR:
ahn01002
]
Cysteine peptidases
Family C82
NCTC12129_03384 (ybiS)
Peptidoglycan biosynthesis and degradation proteins [BR:
ahn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NCTC12129_03384 (ybiS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
VDZ74245
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All DBs
Position
1:3052325..3053245
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AA seq
306 aa
AA seq
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MNMKLRTLLVAAFAVIGFCKTANAVTYPLPTDGSRVVGQNQVITIPEGNNEPLEYFAAQY
QMGFSNMTEANPGVDPYLPKGGTILNIPQQLILPDTPHEGIVINSAEMRLYYYPKGTNTV
IVLPIGIGQLGKDTPINWVTKVERKKAGPTWTPTAKMHAEYAAAGEPLPAVVPAGPDNPM
GLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNDDIKFLFDNVPVGTRVQFINEPVKA
TVEPDGSRYIEVHNPLSTSESQIENNEVVPITLTQAVQTVTSQPDADQSIVEQALQNRSG
MPVRLN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaaattacgcacgcttttagtagcagctttcgctgtcatcggtttttgtaaa
accgccaatgctgtgacctacccactgccgactgacggcagccgtgttgtcgggcaaaac
caggtgatcaccattcctgaaggcaataacgagccgctggaatatttcgccgcgcaatat
cagatgggtttttccaatatgacggaagccaacccgggcgtggacccttacctgccaaaa
ggcggcaccattttaaatattccgcagcagctgatcctgccggatacgccgcatgaaggg
atcgtgattaacagcgccgagatgcgcctgtattactatccgaaaggaacgaataccgtg
atcgtgctgccaatcggtatcggtcagttgggcaaagacacccctatcaactgggtcacc
aaagtagagcgtaagaaagcgggcccgacatggaccccgacggcgaagatgcatgcggaa
tacgcggcagcaggcgaaccgctgccagccgttgtcccggcaggcccggataacccgatg
ggtctgtacgcactctatattggccgcctgtatgctatccacggtactaacgcgaacttc
ggtatcggcctgcgcgtcagccacggctgtgtgcgtctgcgtaacgacgacattaagttc
ctgtttgataacgtgccggttggtacccgcgtacagtttatcaacgagccggtgaaagcc
accgttgagccggacggcagccgctatattgaggttcacaatccgctttccaccagcgaa
tcgcagattgagaacaatgaagtggtgccgatcacgttgacacaggcggtgcagaccgtt
accagccaacctgatgccgaccagagcatcgttgagcaggcgcttcagaaccgttccggt
atgccggtacgtttgaactga
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